| Literature DB >> 30467522 |
Amani M Abdelghany1, Nasser Sadek Rezk1, Mona Mostafa Osman1, Amira I Hamid1, Ashraf Mohammad Al-Breedy2, Hoda A Abdelsattar1.
Abstract
Background : Hepatocellular carcinoma (HCC) is vital medical issue in Egypt. It accounts for 70.48% of all liver tumors among Egyptians. The aim of this study was to determine the diagnostic role of plasma levels of mRNA of lamin B1 by RT-qPCR as an early marker of HCC.Entities:
Keywords: AFP; Hepatocellular carcinoma; RT-qPCR; lamin B1
Mesh:
Substances:
Year: 2018 PMID: 30467522 PMCID: PMC6208568 DOI: 10.12688/f1000research.14795.1
Source DB: PubMed Journal: F1000Res ISSN: 2046-1402
Comparison of serum AFP and lamin B1 between groups using Wilcoxson’s rank-sum test.
| Parameter | Group I vs
| Group I vs
| Group II vs
| |||
|---|---|---|---|---|---|---|
| Z | p-value | Z | p-value | Z | p-value | |
| AFP (ng/dl) | 3.4 | <0.01 | 4.1 | <0.001 | 1.4 | >0.05 |
| Lamin B1 (2 −ΔΔCq) | 4.3 | <0.001 | 4.3 | <0.001 | 0.9 | >0.05 |
AFP, α-fetoprotein
Comparison of AFP and lamin B1 between each two groups of the three stages HCC using Wilcoxson’s rank-sum test.
| Parameter | Stage 0 vs
| Stage 0 vs
| Stage A vs
| |||
|---|---|---|---|---|---|---|
| Z | p-value | Z | p-value | Z | p-value | |
| AFP (ng/dl) | 2.8 | <0.05 | 2.4 | <0.05 | 2.5 | <0.05 |
| Lamin B1 (2 −ΔΔCq) | 3.5 | <0.001 | 3.9 | <0.001 | 3.3 | <0.01 |
AFP, α-fetoprotein.
Statistical comparisons between serum AFP and lamin B1 in Group II versus the three stages of HCC using Wilcoxson’s rank-sum test.
| Parameter | Group II vs
| Group II vs
| Group II vs
| |||
|---|---|---|---|---|---|---|
| Z | p-value | Z | p-value | Z | p-value | |
| AFP (ng/dl) | 2.1 | <0.05 | 3.4 | <0.01 | 3.2 | <0.01 |
| Lamin B1 (2 −ΔΔCq) | 3.4 | <0.01 | 3.4 | <0.01 | 3.7 | <0.001 |
AFP, α-fetoprotein
Diagnostic performance of AFP & Lamin B1 among different studied groups.
| Parameter | Group/stage | Best cut-off | SN% | SP% | PPV% | NPV% | Eff% |
|---|---|---|---|---|---|---|---|
| AFP (ng/dl) | Group I vs II/III | 5.0 | 80 | 90 | 92.3 | 75 | 84 |
| Stage 0 vs Group II | 3.5 | 78.6 | 60 | 73.3 | 66.7 | 70.8 | |
| Stage 0 vs group A | 142 | 71.4 | 92.9 | 83.3 | 86.7 | 85.7 | |
| Lamin B1 (2 −ΔΔCq) | Group I vs II/III | 1.4 | 100 | 90 | 93.4 | 100 | 96 |
| Stage 0 vs Group II | 1.3 | 100 | 90 | 93.3 | 100 | 95.8 | |
| Stage 0 vs A | 2.8 | 100 | 92.9 | 87.5 | 100 | 95.2 | |
| AFP (ng/dl) and
| Group I vs II | 3.5(ng/dl) +
| 100 | 100 | 100 | 100 | 100 |
SN%, sensitivity; SP%, specificity; PPV%, positive predictive value; NPV%, negative predictive value; EFF%, efficacy; AFP, α-fetoprotein.
Figure 1. Receiver operating characteristics curve analysis showing the diagnostic performance of AFP and lamin B1 mRNA for discriminating patients with Group I from Group II and III.
Area under the curve: AFP, 0.822; LMNB1 mRNA, 0.962.
Figure 2. Receiver operating characteristics curve analysis showing the diagnostic performance of AFP and lamin B1 mRNA for discriminating patients with HCC Stage 0 from Group II (those with chronic liver disease).
Area under the curve: AFP, 0.762; LMNB1 mRNA, 0.962.
Figure 3. Multi-receiver operating characteristics curve analysis showing the diagnostic performance of both AFP and lamin B1 mRNA and their combination for discriminating patients with HCC from chronic liver disease.
Area under the curve: AFP, 0.844; LMNB1 mRNA, 0.957; multi-ROC, 1.000.