Literature DB >> 30467026

Targeting the Pentose Phosphate Pathway: Characterization of a New 6PGL Inhibitor.

Anh Tuan Tran1, Aude Sadet2, Paolo Calligari3, Philippe Lopes4, Jamal Ouazzani4, Matthieu Sollogoub1, Emeric Miclet5, Daniel Abergel2.   

Abstract

Human African trypanosomiasis, or sleeping sickness, is a lethal disease caused by the protozoan parasite Trypanosoma brucei. However, although many efforts have been made to understand the biochemistry of this parasite, drug development has led to treatments that are of limited efficiency and of great toxicity. To develop new drugs, new targets must be identified, and among the several metabolic processes of trypanosomes that have been proposed as drug targets, carbohydrate metabolism (glycolysis and the pentose phosphate pathway (PPP)) appears as a promising one. As far as the PPP is concerned, a limited number of studies are related to the glucose-6-phosphate dehydrogenase. In this work, we have focused on the activity of the second PPP enzyme (6-phospho-gluconolactonase (6PGL)) that transforms 6-phosphogluconolactone into 6-phosphogluconic acid. A lactam analog of the natural substrate has been synthesized, and binding of the ligand to 6PGL has been investigated by NMR titration. The ability of this ligand to inhibit 6PGL has also been demonstrated using ultraviolet experiments, and protein-inhibitor interactions have been investigated through docking calculations and molecular dynamics simulations. In addition, a marginal inhibition of the third enzyme of the PPP (6-phosphogluconate dehydrogenase) was also demonstrated. Our results thus open new prospects for targeting T. brucei.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2018        PMID: 30467026      PMCID: PMC6289167          DOI: 10.1016/j.bpj.2018.10.027

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  40 in total

Review 1.  Enzymes of carbohydrate metabolism as potential drug targets.

Authors:  F R Opperdoes; P A Michels
Journal:  Int J Parasitol       Date:  2001-05-01       Impact factor: 3.981

Review 2.  Using chemical shift perturbation to characterise ligand binding.

Authors:  Mike P Williamson
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-03-21       Impact factor: 9.795

3.  SwissParam: a fast force field generation tool for small organic molecules.

Authors:  Vincent Zoete; Michel A Cuendet; Aurélien Grosdidier; Olivier Michielin
Journal:  J Comput Chem       Date:  2011-05-03       Impact factor: 3.376

4.  Three dimensional structure and implications for the catalytic mechanism of 6-phosphogluconolactonase from Trypanosoma brucei.

Authors:  Marc Delarue; Nathalie Duclert-Savatier; Emeric Miclet; Ahmed Haouz; David Giganti; Jamal Ouazzani; Philippe Lopez; Michael Nilges; Véronique Stoven
Journal:  J Mol Biol       Date:  2006-11-22       Impact factor: 5.469

5.  Improved sensitivity of HSQC spectra of exchanging protons at short interscan delays using a new fast HSQC (FHSQC) detection scheme that avoids water saturation.

Authors:  S Mori; C Abeygunawardana; M O Johnson; P C van Zijl
Journal:  J Magn Reson B       Date:  1995-07

6.  A 2.8 A resolution structure of 6-phosphogluconate dehydrogenase from the protozoan parasite Trypanosoma brucei: comparison with the sheep enzyme accounts for differences in activity with coenzyme and substrate analogues.

Authors:  C Phillips; J Dohnalek; S Gover; M P Barrett; M J Adams
Journal:  J Mol Biol       Date:  1998-09-25       Impact factor: 5.469

7.  Identification of attractive drug targets in neglected-disease pathogens using an in silico approach.

Authors:  Gregory J Crowther; Dhanasekaran Shanmugam; Santiago J Carmona; Maria A Doyle; Christiane Hertz-Fowler; Matthew Berriman; Solomon Nwaka; Stuart A Ralph; David S Roos; Wesley C Van Voorhis; Fernán Agüero
Journal:  PLoS Negl Trop Dis       Date:  2010-08-24

8.  Investigation of glucose binding sites on insulin.

Authors:  Vincent Zoete; Markus Meuwly; Martin Karplus
Journal:  Proteins       Date:  2004-05-15

Review 9.  6-phosphogluconate dehydrogenase: a target for drugs in African trypanosomes.

Authors:  Stefania Hanau; Eliana Rinaldi; Franco Dallocchio; Ian H Gilbert; Christophe Dardonville; Margaret J Adams; Sheila Gover; Michael P Barrett
Journal:  Curr Med Chem       Date:  2004-10       Impact factor: 4.530

Review 10.  The Pentose Phosphate Pathway in Parasitic Trypanosomatids.

Authors:  Julie Kovářová; Michael P Barrett
Journal:  Trends Parasitol       Date:  2016-05-09
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