Literature DB >> 30465139

Quantitative proteomic analysis reveals novel stress-associated active proteins (SAAPs) and pathways involved in modulating tolerance of wheat under terminal heat.

Ranjeet R Kumar1, Khushboo Singh2, Sumedha Ahuja2, Mohd Tasleem2, Indra Singh3, Sanjeev Kumar3, Monendra Grover3, Dwijesh Mishra3, Gyanendra K Rai4, Suneha Goswami2, Gyanendra P Singh5, Viswanathan Chinnusamy6, Anil Rai3, Shelly Praveen7.   

Abstract

Terminal heat stress has detrimental effect on the growth and yield of wheat. Very limited information is available on heat stress-associated active proteins (SAAPs) in wheat. Here, we have identified 159 protein groups with 4271 SAAPs in control (22 ± 3 °C) and HS-treated (38 °C, 2 h) wheat cvs. HD2985 and HD2329 using iTRAQ. We identified 3600 proteins to be upregulated and 5825 proteins to be downregulated in both the wheat cvs. under HS. We observed 60.3% of the common SAAPs showing upregulation in HD2985 (thermotolerant) and downregulation in HD2329 (thermosusceptible) under HS. GO analysis showed proton transport (molecular), photosynthesis (biological), and ATP binding (cellular) to be most altered under HS. Most of the SAAPs identified were observed to be chloroplast localized and involved in photosynthesis. Carboxylase enzyme was observed most abundant active enzymes in wheat under HS. An increase in the degradative isoenzymes (α/β-amylases) was observed, as compared to biosynthesis enzymes (ADP-glucophosphorylase, soluble starch synthase, etc.) under HS. Transcript profiling showed very high relative fold expression of HSP17, CDPK, Cu/Zn SOD, whereas downregulation of AGPase, SSS under HS. The identified SAAPs can be used for targeted protein-based precision wheat-breeding program for the development of 'climate-smart' wheat.

Entities:  

Keywords:  2-DE; AGPase; Amylases; CDPK; DEGs; Developing grains; Endospermic tissue; HSP17; Immunoblotting; MALDI; Photosynthesis; Proteomic; RuBisCo; SAAPs; SAGs; Soluble starch synthase; Source/sink ratio; Starch biosynthesis pathway; Sucrose synthase; Terminal HS; Thermotolerance; Wheat; iTRAQ; qRT-PCR

Mesh:

Substances:

Year:  2018        PMID: 30465139     DOI: 10.1007/s10142-018-0648-2

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  33 in total

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