Literature DB >> 30465133

Designing of an epitope-based peptide vaccine against walking pneumonia: an immunoinformatics approach.

P Ambili Unni1, A M Mohamed Thoufic Ali2, Madhusmita Rout1, A Thabitha1, S Vino3, S Sajitha Lulu4.   

Abstract

Mycoplasma pneumoniae is a substantial respiratory pathogen that develops not only pneumonia but also other respiratory diseases, which mimic viral respiratory syndromes. Nevertheless, vaccine development for this pathogen delays behind as immunity correlated with protection is now predominantly unknown. In the present study, an immunoinformatics pipeline is utilized for epitope-based peptide vaccine design, which can trigger a critical immune response against M. pneumoniae. A total of 105 T-cell epitopes from 12 membrane associated proteins and 7 T-cell epitopes from 5 cytadherence proteins of M. pneumoniae were obtained and validated. Thus, 18 peptides with 9-mer core sequence were identified as best T-cell epitopes by considering the number of residues with > 75% in favored region. Further, the crucial screening studies predicted three peptides with good binding affinity towards HLA molecules as best T-cell and B-cell epitopes. Based on this result, visualization, and dynamic simulation for the three epitopes (WIHGLILLF, VILLFLLLF, and LLAWMLVLF) were assessed. The predicted epitopes needs to be further validated for their adept use as vaccine. Collectively, the study opens up a new horizon with extensive therapeutic application against M. pneumoniae and its associated diseases.

Entities:  

Keywords:  Epitope; Immunoinformatics; Mycoplasma pneumoniae; Peptide; Vaccine

Mesh:

Substances:

Year:  2018        PMID: 30465133     DOI: 10.1007/s11033-018-4505-0

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  46 in total

1.  MYCOPLASMA PNEUMONIAE (EATON ATYPICAL PNEUMONIA AGENT) IN CHILDREN'S RESPIRATORY INFECTIONS.

Authors:  H D BAERNSTEIN; E TREVISANI; S AXTELL; J J QUILLIGAN
Journal:  J Pediatr       Date:  1965-05       Impact factor: 4.406

2.  ClusPro: a fully automated algorithm for protein-protein docking.

Authors:  Stephen R Comeau; David W Gatchell; Sandor Vajda; Carlos J Camacho
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

3.  Structural evidence for induced fit as a mechanism for antibody-antigen recognition.

Authors:  J M Rini; U Schulze-Gahmen; I A Wilson
Journal:  Science       Date:  1992-02-21       Impact factor: 47.728

4.  Prediction of residues in discontinuous B-cell epitopes using protein 3D structures.

Authors:  Pernille Haste Andersen; Morten Nielsen; Ole Lund
Journal:  Protein Sci       Date:  2006-09-25       Impact factor: 6.725

5.  A semi-empirical method for prediction of antigenic determinants on protein antigens.

Authors:  A S Kolaskar; P C Tongaonkar
Journal:  FEBS Lett       Date:  1990-12-10       Impact factor: 4.124

6.  Chlamydia pneumoniae and Mycoplasma pneumoniae in young children from China with community-acquired pneumonia.

Authors:  Gang Liu; Deborah F Talkington; Barry S Fields; Orin S Levine; Yonghong Yang; Maria Lucia C Tondella
Journal:  Diagn Microbiol Infect Dis       Date:  2005-05       Impact factor: 2.803

7.  Results of molecular detection of Mycoplasma pneumoniae among patients with acute respiratory infection and in their household contacts reveals children as human reservoirs.

Authors:  J W Dorigo-Zetsma; B Wilbrink; H van der Nat; A I Bartelds; M L Heijnen; J Dankert
Journal:  J Infect Dis       Date:  2000-12-27       Impact factor: 5.226

8.  Barriers and facilitators of pneumococcal vaccination among the elderly.

Authors:  Richard Kent Zimmerman; Tammy A Santibanez; Michael J Fine; Janine E Janosky; Mary Patricia Nowalk; Inis Jane Bardella; Mahlon Raymund; Stephen A Wilson
Journal:  Vaccine       Date:  2003-03-28       Impact factor: 3.641

Review 9.  Mycoplasma pneumoniae and its role as a human pathogen.

Authors:  Ken B Waites; Deborah F Talkington
Journal:  Clin Microbiol Rev       Date:  2004-10       Impact factor: 26.132

10.  VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccines.

Authors:  Irini A Doytchinova; Darren R Flower
Journal:  BMC Bioinformatics       Date:  2007-01-05       Impact factor: 3.169

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  1 in total

1.  Multi-epitope-Based Vaccine Designed by Targeting Cytoadherence Proteins of Mycoplasma gallisepticum.

Authors:  Susithra Priyadarshni Mugunthan; Mani Chandra Harish
Journal:  ACS Omega       Date:  2021-05-17
  1 in total

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