| Literature DB >> 30464622 |
Abstract
BACKGROUND: Data from published articles on the relationship between MMP polymorphisms and prostate cancer risk are conflicted and inconclusive, so a meta-analysis and systematic review were performed to assess the relationship.Entities:
Keywords: matrix metalloproteinase; meta-analysis; polymorphism; prostate cancer
Year: 2018 PMID: 30464622 PMCID: PMC6223342 DOI: 10.2147/CMAR.S177551
Source DB: PubMed Journal: Cancer Manag Res ISSN: 1179-1322 Impact factor: 3.989
Figure 1Flow diagram of study-selection process.
Characteristics of included studies
| Study | Year | Country | Case-group sample type | Control-group source | Genotyping method | MMP | Polymorphism | Sample size (case/control) | HWE | Quality score |
|---|---|---|---|---|---|---|---|---|---|---|
|
| ||||||||||
| Albayrak et al | 2007 | Turkey | Blood | HB | PCR-RFLP | MMP1 | rs1799750 | 55/43 | <0.01 | 7 |
| Jacobs et al | 2008 | USA | Blood | ND | MassArray | MMP2 | rs1477017 | 1,417/1,441 | 0.182 | 9 |
| Jacobs et al | 2008 | USA | Blood | ND | MassArray | MMP2 | rs17301608 | 1,414/1,432 | 0.773 | 9 |
| Jacobs et al | 2008 | USA | Blood | ND | MassArray | MMP2 | rs11639960 | 1,410/1,439 | 0.357 | 9 |
| dos Reis et al | 2009 | Brazil | Tissue | HB | TaqMan | MMP1 | rs1799750 | 100/100 | 0.117 | 7 |
| dos Reis et al | 2009 | Brazil | Tissue | HB | TaqMan | MMP2 | rs243865 | 100/100 | <0.01 | 6 |
| dos Reis et al | 2009 | Brazil | Tissue | HB | TaqMan | MMP7 | rs11568818 | 100/100 | 0.035 | 6 |
| dos Reis et al | 2009 | Brazil | Tissue | HB | TaqMan | MMP9 | rs17576 | 100/100 | <0.01 | 6 |
| Tsuchiya et al | 2009 | Japan | Blood | PB | Direct sequencing | MMP1 | rs1799750 | 283/251 | 0.113 | 13 |
| Srivastava et al | 2012 | India | Blood | Mixed | PCR-RFLP | MMP2 | rs243865 | 190/200 | 0.919 | 10 |
| Srivastava et al | 2012 | India | Blood | Mixed | PCR-RFLP | MMP2 | rs2285053 | 190/200 | 0.581 | 10 |
| Srivastava et al | 2013 | India | Blood | Mixed | PCR-RFLP | MMP3 | 1171-5A/6A | 150/200 | 0.235 | 10 |
| Srivastava et al | 2013 | India | Blood | Mixed | PCR-RFLP | MMP3 | 1161A/G | 150/200 | 0.793 | 10 |
| Srivastava et al | 2013 | India | Blood | Mixed | PCR-RFLP | MMP3 | 5356A/G | 150/200 | 0.658 | 10 |
| Yaykasli et al | 2014 | Turkey | Blood | HB | PCR-RFLP | MMP2 | rs243865 | 61/46 | 0.758 | 6 |
| Adabi et al | 2015 | Iran | Blood | PB | PCR-RFLP | MMP2 | rs243865 | 102/139 | 0.885 | 10 |
| Salavati et al | 2017 | Iran | Tissue | HB | HRM | MMP2 | rs243865 | 50/54 | <0.01 | 7 |
| Liao et al | 2018 | China | Blood | HB | PCR-RFLP | MMP1 | rs1799750 | 218/436 | 0.03 | 7 |
| Białkowska et al | 2018 | Poland | Blood | PB | TaqMan | MMP1 | rs1799750 | 197/197 | 0.226 | 8 |
| Białkowska et al | 2018 | Poland | Blood | PB | TaqMan | MMP2 | rs243865 | 197/197 | 0.60 | 8 |
| Białkowska et al | 2018 | Poland | Blood | PB | TaqMan | MMP7 | rs11568818 | 197/197 | 0.411 | 8 |
| Białkowska et al | 2018 | Poland | Blood | PB | TaqMan | MMP13 | rs2252070 | 197/197 | 0.943 | 8 |
Abbreviations: HB, hospital-based; PB, population-based; ND, not described; HWE, Hardy–Weinberg equilibrium; PCR-RFLP, polymerase chain-reaction restricted-fragment-length polymorphism; HRM, high-resolution melting.
Meta-analysis of association between MMP1 rs1799750 and prostate cancer
| Comparison model | Subgroup | Studies | OR (95% CI) | |||
|---|---|---|---|---|---|---|
|
| ||||||
| Homozygote | Overall | 5 | 1.16 (0.91–1.47) | 0.237 | 15.9 | 0.313 |
| Blood | 4 | 1.06 (0.82–1.37) | 0.632 | 0 | 0.919 | |
| Heterozygote | Overall | 5 | 1.12 (0.94–1.33) | 0.223 | 12.9 | 0.332 |
| Blood | 4 | 1.06 (0.87–1.27) | 0.575 | 0 | 0.648 | |
| Dominant | Overall | 5 | 1.09 (0.94–1.27) | 0.251 | 0.4 | 0.404 |
| Blood | 4 | 1.04 (0.89–1.22) | 0.617 | 0 | 0.832 | |
| Recessive | Overall | 5 | 1.09 (0.87–1.37) | 0.471 | 0 | 0.666 |
| Blood | 4 | 1.03 (0.81–1.31) | 0.818 | 0 | 0.982 | |
| Additive | Overall | 5 | 1.09 (0.97–1.23) | 0.163 | 34.5 | 0.191 |
| Blood | 4 | 1.04 (0.91–1.18) | 0.57 | 0 | 0.871 | |
Notes:
P-value of Z-test for OR;
P-value of Q-test for heterogneity.
Figure 2Forest plots of MMP1 rs1799750 and prostate cancer risk.
Notes: (A) Homozygote model; (B) heterozygote model; (C) dominant model; (D) recessive model; (E) additive model.
Meta-analysis of association between MMP2 rs243865 and prostate cancer
| Comparison model | Subgroup | Studies | OR (95% CI) | |||
|---|---|---|---|---|---|---|
|
| ||||||
| Homozygote | Overall | 6 | 1.0 (0.84–1.20) | 0.97 | 0 | 0.998 |
| Blood | 4 | 0.99 (0.81–1.21) | 0.92 | 0 | 0.986 | |
| Tissue | 2 | 1.06 (0.71–1.56) | 0.787 | 0 | 0.825 | |
| Heterozygote | Overall | 6 | 1.08 (0.84–1.40) | 0.54 | 0 | 0.894 |
| Blood | 4 | 1.01 (0.76–1.34) | 0.967 | 0 | 0.972 | |
| Tissue | 2 | 1.48 (0.82–2.68) | 0.919 | 0 | 0.777 | |
| Dominant | Overall | 6 | 1.01 (0.87–1.18) | 0.875 | 0 | 0.997 |
| Blood | 4 | 1.0 (0.84–1.18) | 0.963 | 0 | 0.994 | |
| Tissue | 2 | 1.08 (0.77–1.50) | 0.66 | 0 | 0.778 | |
| Recessive | Overall | 6 | 0.9 (0.76–1.06) | 0.206 | 0 | 0.957 |
| Blood | 4 | 0.91 (0.75–1.09) | 0.305 | 0 | 0.801 | |
| Tissue | 2 | 0.87 (0.60–1.25) | 0.442 | 0 | 0.886 | |
| Additive | Overall | 6 | 0.96 (0.86–1.08) | 0.521 | 0 | 0.987 |
| Blood | 4 | 0.96 (0.85–1.09) | 0.511 | 0 | 0.892 | |
| Tissue | 2 | 0.98 (0.77–1.26) | 0.903 | 0 | 0.871 | |
Notes:
P-value of Z-test for OR;
P-value of Q-test for heterogeneity.
Figure 3Forest plots of MMP2 rs243865 and prostate cancer risk.
Notes: (A) Homozygote model; (B) heterozygote model; (C) dominant model; (D) recessive model; (E) additive model.
Meta-analysis of association between MMP7 rs11568818 and prostate cancer
| Comparison model | Studies | OR (95% CI) | |||
|---|---|---|---|---|---|
|
| |||||
| Homozygote | 2 | 0.95 (0.67–1.37) | 0.796 | 45.9 | 0.174 |
| Heterozygote | 2 | 0.98 (0.72–1.33) | 0.908 | 0 | 0.435 |
| Dominant | 2 | 0.99 (0.77–1.26) | 0.917 | 0 | 0.39 |
| Recessive | 2 | 0.91 (0.66–1.27) | 0.592 | 53.7 | 0.142 |
| Additive | 2 | 0.97 (0.80–1.17) | 0.72 | 56 | 0.132 |
Notes:
P-value of Z-test for OR;
P-value of Q-test for heterogeneity.
Figure 4Forest plots of MMP7 rs11568818 and prostate cancer risk.
Notes: (A) Homozygote model; (B) heterozygote model; (C) dominant model; (D) recessive model; (E) additive model.
Figure 5Funnel plots of MMP1 rs1799750 and prostate cancer risk.
Notes: (A) Homozygote model; (B) heterozygote model; (C) dominant model; (D) recessive model; (E) additive model.
Figure 6Funnel plots of MMP2 rs243865 and prostate cancer risk.
Notes: (A) Homozygote model; (B) heterozygote model; (C) dominant model; (D) recessive model; (E) additive model.
Systematic review of association between MMPs polymorphisms and prostate cancer
| A Homozygote model, Heterozygote model, Dominant model
| |||||||
|---|---|---|---|---|---|---|---|
| MMP | SNP | Homozygote model
| Heterozygote model
| Dominant model
| |||
| OR(95% CI) | OR(95% CI) | OR(95% CI) | |||||
|
| |||||||
| MMP2 | rs2285053 | 0.95 (0.663–1.361) | 0.780 | 0.975 (0.617–1.542) | 0.915 | 0.976 (0.735–1.297) | 0.868 |
| MMP2 | rs1477017 | 0.937 (0.807–1.089) | 0.398 | 0.974 (0.842–1.128) | 0.726 | 0.975 (0.876–1.086) | 0.646 |
| MMP2 | rs17301608 | 0.929 (0.797–1.083) | 0.346 | 0.960 (0.831–1.109) | 0.583 | 0.969 (0.870–1.080) | 0.568 |
| MMP2 | rs11639960 | 0.958 (0.827–1.111) | 0.573 | 0.994 (0.857–1.153) | 0.933 | 0.986 (0.886–1.098) | 0.802 |
| MMP3 | 1171-5A/6A | 3.339 (1.035–10.774) | 0.044 | 0.837 (0.530–1.322) | 0.446 | 0.961 (0.629–1.468) | 0.853 |
| MMP3 | 1161A/G | 1.068 (0.712–1.603) | 0.751 | 1.096 (0.702–1.711) | 0.686 | 1.042 (0.768–1.413) | 0.792 |
| MMP3 | 5356A/G | 1.081 (0.684–1.709) | 0.738 | 1.14 (0.763–1.706) | 0.522 | 1.064 (0.782–1.447) | 0.695 |
| MMP9 | rs17576 | 0.025 (0.002–0.242) | 0.001 | 0.444 (0.281–0.702) | 0.001 | 0.449 (0.286–0.705) | 0.001 |
| MMP13 | rs2252070 | 0.957 (0.653–1.402) | 0.822 | 0.988 (0.653–1.494) | 0.954 | 0.984 (0.739–1.309) | 0.909 |
PRISMA checklist
| Section/topic | # | Checklist item | Reported on page # | |
|---|---|---|---|---|
| Title | 1 | Identify the report as a systematic review, meta-analysis, or both. | 1 | |
| Structured summary | 2 | Provide a structured summary including, as applicable: background, objectives, data sources, study-eligibility criteria, participants, interventions, study appraisal and synthesis methods, results, limitations, conclusions and implications of key findings, systematic review registration number. | 2–3 | |
| Rationale | 3 | Describe the rationale for the review in the context of what is already known. | 3 | |
| Objectives | 4 | Provide an explicit statement of questions being addressed with reference to participants, interventions, comparisons, outcomes, and study design (PICOS). | 3–4 | |
| Protocol and registration | 5 | Indicate if a review protocol exists, if and where it can be accessed (eg, web address), and if available provide registration information, including registration number. | ||
| Eligibility criteria | 6 | Specify study characteristics (eg, PICOS, length of follow-up) and report characteristics (eg, years considered, language, publication status) used as criteria for eligibility, giving rationale. | 4 | |
| Information sources | 7 | Describe all information sources (eg, databases with dates of coverage, contact with study authors to identify additional studies) in the search and date last searched. | 4 | |
| Search | 8 | Present full electronic search strategy for at least one database, including any limits used, such that it could be repeated. | 4 | |
| Study selection | 9 | State the process for selecting studies (ie, screening, eligibility, included in systematic review, and if applicable included in the meta-analysis). | 4 | |
| Data collection process | 10 | Describe method of data extraction from reports (eg, piloted forms, independently, in duplicate) and any processes for obtaining and confirming data from investigators. | 4 | |
| Data items | 11 | List and define all variables for which data were sought (eg, PICOS, funding sources) and any assumptions and simplifications made. | ||
| Risk of bias in individual studies | 12 | Describe methods used for assessing risk of bias of individual studies (including specification of whether this was done at the study or outcome level), and how this information is to be used in any data synthesis. | ||
| Summary measures | 13 | State the principal summary measures (eg, risk ratio, difference in means). | 5 | |
| Synthesis of results | 14 | Describe the methods of handling data and combining results of studies, if done, including measures of consistency (eg, | 5 | |
| Risk of bias across studies | 15 | Specify any assessment of risk of bias that may affect the cumulative evidence (eg, publication bias, selective reporting within studies). | 5–6 | |
| Additional analyses | 16 | Describe methods of additional analyses (eg, sensitivity or subgroup analyses, meta- regression) if done, indicating which were prespecified. | 5–6 | |
| Study selection | 17 | Give numbers of studies screened, assessed for eligibility, and included in the review, with reasons for exclusions at each stage, ideally with a flow diagram. | 6 | |
| Study characteristics | 18 | For each study, present characteristics for which data were extracted (eg, study size, PICOS, follow-up period) and provide the citations. | 6–7 | |
| Risk of bias within studies | 19 | Present data on risk of bias of each study, and if available any outcome-level assessment (see item 12). | ||
| Results of individual studies | 20 | For all outcomes considered (benefits or harms), present, for each study: (a) simple summary data for each intervention group; (b) effect estimates and confidence intervals, ideally with a forest plot. | 7 | |
| Synthesis of results | 21 | Present results of each meta-analysis done, including confidence intervals and measures of consistency. | 7 | |
| Risk of bias across studies | 22 | Present results of any assessment of risk of bias across studies (see item 15). | 8 | |
| Additional analysis | 23 | Give results of additional analyses, if done (eg, sensitivity or subgroup analyses, meta- regression [see item 16]). | 7 | |
| Summary of evidence | 24 | Summarize the main findings, including the strength of evidence for each main outcome; consider their relevance to key groups (eg, health-care providers, users, and policymakers). | 9 | |
| Limitations | 25 | Discuss limitations at study and outcome level (eg, risk of bias), and at review level (eg, incomplete retrieval of identified research, reporting bias). | 10 | |
| Conclusions | 26 | Provide a general interpretation of the results in the context of other evidence, and implications for future research. | 11 | |
| Funding | 27 | Describe sources of funding for the systematic review and other support (eg, supply of data); role of funders for the systematic review. | ||
Quality-assessment scores
| Criteria | Score |
|---|---|
|
| |
| Representativeness of case | |
| Selected from population cancer registry | 2 |
| Selected from hospital | 1 |
| No method of selection described | 0 |
| Representativeness of control | |
| Population-based | 3 |
| Mixed | 2 |
| Hospital-based | 1 |
| Not described | 0 |
| Ascertainment of cancer case | |
| Histopathological confirmation | 2 |
| By patient medical record | 1 |
| Not described | 0 |
| Control selection | |
| Controls matched with cases by age and sex | 2 |
| Controls matched with cases only by age or by sex | 1 |
| Not matched or not described | 0 |
| Genotyping examination | |
| Genotyping done blindly and quality control | 2 |
| Only genotyping done blindly or quality control | 1 |
| Not described | 0 |
| HWE | |
| HWE in the control group | 1 |
| HWD in the control group or not mentioned | 0 |
| >1,000 | 3 |
| 501–1,000 | 2 |
| 201–500 | 1 |
| ≤200 | 0 |
Abbreviations: HWE, Hardy–Weinberg equilibrium; HWD, HW disequilibrium.
Definition of comparison models
| MMP | SNP | Homozygote | Heterozygote | Dominant | Recessive | Additive |
|---|---|---|---|---|---|---|
|
| ||||||
| MMP1 | rs1799750 | 1G1G vs 2G2G | 1G2G vs 2G2G | 1G1G+1G2G vs 2G2G | 1G1G vs 1G2G+2G2G | 1G vs 2G |
| MMP2 | rs243865 | CC vs TT | CT vs TT | CC+CT vs TT | CC vs CT+TT | C vs T |
| MMP2 | rs2285053 | CC vs TT | CT vs TT | CC+CT vs TT | CC vs CT+TT | C vs T |
| MMP2 | rs1477017 | AA vs GG | AG vs GG | AA+AG vs GG | AA vs AG+GG | A vs G |
| MMP2 | rs17301608 | CC vs TT | CT vs TT | CC+CT vs TT | CC vs CT+TT | C vs T |
| MMP2 | rs11639960 | AA vs GG | AG vs GG | AA+AG vs GG | AA vs AG+GG | A vs G |
| MMP3 | 1171-5A/6A | 5A5A vs 6A6A | 5A6A vs 6A6A | 5A5A+5A6A vs 6A6A | 5A5A vs 5A6A+6A6A | 5A vs 6A |
| MMP3 | 1161-A/G | AA vs GG | AG vs GG | AA+AG vs GG | AA vs AG+GG | A vs G |
| MMP3 | 5356-A/G | AA vs GG | AG vs GG | AA+AG vs GG | AA vs AG+GG | A vs G |
| MMP7 | rs11568818 | AA vs GG | AG vs GG | AA+AG vs GG | AA vs AG+GG | A vs G |
| MMP9 | rs17576 | AA vs GG | AG vs GG | AA+AG vs GG | AA vs AG+GG | A vs G |
| MMP13 | rs2252070 | TT vs CC | TC vs CC | TT+TC vs CC | TT vs TC +CC | T vs C |
Frequency of genotype in studies from meta-analysis. (A) MMP1 rs1799750; (B) MMP2 rs243865; (C) MMP7 rs11568818
| A | ||||||||
|---|---|---|---|---|---|---|---|---|
| First author | MMP | SNP | Case | Control | ||||
| 1G1G | 1G2G | 2G2G | 1G1G | 1G2G | 2G2G | |||
| Albayrak S | MMP1 | rs1799750 | 10 | 7 | 38 | 7 | 3 | 33 |
| Dos Reis ST | MMP1 | rs1799750 | 21 | 52 | 27 | 11 | 34 | 55 |
| Tsuchiya N | MMP1 | rs1799750 | 35 | 122 | 126 | 33 | 100 | 118 |
| Liao CH | MMP1 | rs1799750 | 51 | 88 | 79 | 96 | 193 | 147 |
| Białkowska K | MMP1 | rs1799750 | 56 | 105 | 36 | 54 | 90 | 53 |
| Dos Reis ST | MMP2 | rs243865 | 50 | 38 | 12 | 59 | 20 | 21 |
| Srivastava P | MMP2 | rs243865 | 101 | 78 | 11 | 131 | 62 | 7 |
| Yaykasli KO | MMP2 | rs243865 | 51 | 7 | 3 | 42 | 4 | 0 |
| Adabi Z | MMP2 | rs243865 | 74 | 27 | 0 | 113 | 23 | 1 |
| Shajarehpoor Salavati L | MMP2 | rs243865 | 34 | 11 | 5 | 41 | 7 | 6 |
| Białkowska K | MMP2 | rs243865 | 104 | 79 | 14 | 101 | 78 | 18 |
| Dos Reis ST | MMP7 | rs11568818 | 33 | 41 | 26 | 25 | 39 | 36 |
| Białkowska K | MMP7 | rs11568818 | 59 | 100 | 38 | 76 | 97 | 24 |
Frequency of genotype in studies from systematic review
| First author | MMP | SNP | Case | Control | ||||
|---|---|---|---|---|---|---|---|---|
| Srivastava P | MMP2 | rs2285053 | CC | CT | TT | CC | CT | TT |
| 101 | 78 | 11 | 131 | 62 | 7 | |||
| Jacobs EJ | MMP2 | rs1477017 | AA | AG | GG | AA | AG | GG |
| 566 | 645 | 206 | 639 | 624 | 178 | |||
| Jacobs EJ | MMP2 | rs17301608 | CC | CT | TT | CC | CT | TT |
| 541 | 655 | 218 | 600 | 650 | 182 | |||
| Jacobs EJ | MMP2 | rs11639960 | AA | AG | GG | AA | AG | GG |
| 597 | 645 | 168 | 675 | 610 | 154 | |||
| Srivastava P | MMP3 | 1171-5A/6A | 5A5A | 5A6A | 6A6A | 5A5A | 5A6A | 6A6A |
| 11 | 38 | 101 | 4 | 64 | 132 | |||
| Srivastava P | MMP3 | 1161-A/G | AA | AG | GG | AA | AG | GG |
| 77 | 66 | 7 | 103 | 80 | 17 | |||
| Srivastava P | MMP3 | 5356-A/G | AA | AG | GG | AA | AG | GG |
| 54 | 84 | 12 | 84 | 89 | 27 | |||
| Dos Reis ST | MMP9 | rs17576 | AA | AG | GG | AA | AG | GG |
| 1 | 43 | 56 | 5 | 93 | 2 | |||
| Białkowska K | MMP13 | rs2252070 | TT | CT | CC | TT | CT | CC |
| 92 | 87 | 18 | 104 | 78 | 15 | |||