Literature DB >> 30463964

Functional Analysis and Antivirulence Properties of a New Depolymerase from a Myovirus That Infects Acinetobacter baumannii Capsule K45.

Hugo Oliveira1, Ana Rita Costa1, Alice Ferreira1, Nico Konstantinides1, Sílvio B Santos1, Maarten Boon2, Jean-Paul Noben3, Rob Lavigne2, Joana Azeredo4.   

Abstract

Acinetobacter baumannii is an important pathogen causative of health care-associated infections and is able to rapidly develop resistance to all known antibiotics, including colistin. As an alternative therapeutic agent, we have isolated a novel myovirus (vB_AbaM_B9) which specifically infects and makes lysis from without in strains of the K45 and K30 capsule types, respectively. Phage B9 has a genome of 93,641 bp and encodes 167 predicted proteins, of which 29 were identified by mass spectrometry. This phage holds a capsule depolymerase (B9gp69) able to digest extracted exopolysaccharides of both K30 and K45 strains and remains active in a wide range of pH values (5 to 9), ionic strengths (0 to 500 mM), and temperatures (20 to 80°C). B9gp69 was demonstrated to be nontoxic in a cell line model of the human lung and to make the K45 strain fully susceptible to serum killing in vitro Contrary to the case with phage, no resistance development was observed by bacteria targeted with the B9gp69. Therefore, capsular depolymerases may represent attractive antimicrobial agents against A. baumannii infections.IMPORTANCE Currently, phage therapy has revived interest for controlling hard-to-treat bacterial infections. Acinetobacter baumannii is an emerging Gram-negative pathogen able to cause a variety of nosocomial infections. Additionally, this species is becoming more resistant to several classes of antibiotics. Here we describe the isolation of a novel lytic myophage B9 and its recombinant depolymerase. While the phage can be a promising alternative antibacterial agent, its success in the market will ultimately depend on new regulatory frameworks and general public acceptance. We therefore characterized the phage-encoded depolymerase, which is a natural enzyme that can be more easily managed and used. To our knowledge, the therapeutic potential of phage depolymerase against A. baumannii is still unknown. We show for the first time that the K45 capsule type is an important virulence factor of A. baumannii and that capsule removal via the recombinant depolymerase activity helps the host immune system to combat the bacterial infection.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  Acinetobacter baumanniizzm321990; antivirulence; bacteriophage; depolymerase

Mesh:

Substances:

Year:  2019        PMID: 30463964      PMCID: PMC6364002          DOI: 10.1128/JVI.01163-18

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  66 in total

1.  Reliability of transmembrane predictions in whole-genome data.

Authors:  Lukas Käll; Erik L L Sonnhammer
Journal:  FEBS Lett       Date:  2002-12-18       Impact factor: 4.124

Review 2.  Capsular polysaccharides and their role in virulence.

Authors:  Clare M Taylor; Ian S Roberts
Journal:  Contrib Microbiol       Date:  2005

Review 3.  Bacteriophage polysaccharide depolymerases and biomedical applications.

Authors:  Jianlong Yan; Jinxiao Mao; Jiaoxiao Mao; Jianping Xie
Journal:  BioDrugs       Date:  2014-06       Impact factor: 5.807

4.  Structure of the neutral capsular polysaccharide of Acinetobacter baumannii NIPH146 that carries the KL37 capsule gene cluster.

Authors:  Nikolay P Arbatsky; Mikhail M Shneider; Johanna J Kenyon; Alexander S Shashkov; Anastasiya V Popova; Konstantin A Miroshnikov; Nikolay V Volozhantsev; Yuriy A Knirel
Journal:  Carbohydr Res       Date:  2015-05-21       Impact factor: 2.104

5.  Capsule polysaccharide is a bacterial decoy for antimicrobial peptides.

Authors:  Enrique Llobet; Juan M Tomás; Jose A Bengoechea
Journal:  Microbiology       Date:  2008-12       Impact factor: 2.777

6.  Tn6168, a transposon carrying an ISAba1-activated ampC gene and conferring cephalosporin resistance in Acinetobacter baumannii.

Authors:  Mohammad Hamidian; Ruth M Hall
Journal:  J Antimicrob Chemother       Date:  2013-08-06       Impact factor: 5.790

7.  Identification of EPS-degrading activity within the tail spikes of the novel Pseudomonas putida phage AF.

Authors:  Anneleen Cornelissen; Pieter-Jan Ceyssens; Victor N Krylov; Jean-Paul Noben; Guido Volckaert; Rob Lavigne
Journal:  Virology       Date:  2012-10-16       Impact factor: 3.616

8.  Capsule-Targeting Depolymerase, Derived from Klebsiella KP36 Phage, as a Tool for the Development of Anti-Virulent Strategy.

Authors:  Grażyna Majkowska-Skrobek; Agnieszka Łątka; Rita Berisio; Barbara Maciejewska; Flavia Squeglia; Maria Romano; Rob Lavigne; Carsten Struve; Zuzanna Drulis-Kawa
Journal:  Viruses       Date:  2016-12-01       Impact factor: 5.048

9.  Identification and Characterization of Dpo42, a Novel Depolymerase Derived from the Escherichia coli Phage vB_EcoM_ECOO78.

Authors:  Zhimin Guo; Jing Huang; Guangmou Yan; Liancheng Lei; Shuang Wang; Ling Yu; Liang Zhou; Anchong Gao; Xin Feng; Wenyu Han; Jingmin Gu; Junling Yang
Journal:  Front Microbiol       Date:  2017-08-02       Impact factor: 5.640

10.  Branched Lateral Tail Fiber Organization in T5-Like Bacteriophages DT57C and DT571/2 is Revealed by Genetic and Functional Analysis.

Authors:  Alla K Golomidova; Eugene E Kulikov; Nikolai S Prokhorov; Ricardo С Guerrero-Ferreira; Yuriy A Knirel; Elena S Kostryukova; Karina K Tarasyan; Andrey V Letarov
Journal:  Viruses       Date:  2016-01-21       Impact factor: 5.048

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  20 in total

1.  A Tailspike with Exopolysaccharide Depolymerase Activity from a New Providencia stuartii Phage Makes Multidrug-Resistant Bacteria Susceptible to Serum-Mediated Killing.

Authors:  Hugo Oliveira; Graça Pinto; Bruna Mendes; Oscar Dias; Hanne Hendrix; Ergun Akturk; Jean-Paul Noben; Jan Gawor; Małgorzata Łobocka; Rob Lavigne; Joana Azeredo
Journal:  Appl Environ Microbiol       Date:  2020-06-17       Impact factor: 4.792

2.  K2 Capsule Depolymerase Is Highly Stable, Is Refractory to Resistance, and Protects Larvae and Mice from Acinetobacter baumannii Sepsis.

Authors:  Hugo Oliveira; Ana Mendes; Alexandra G Fraga; Alice Ferreira; Andreia I Pimenta; Dalila Mil-Homens; Arsénio M Fialho; Jorge Pedrosa; Joana Azeredo
Journal:  Appl Environ Microbiol       Date:  2019-08-14       Impact factor: 4.792

3.  Therapeutic Effects of Intravitreously Administered Bacteriophage in a Mouse Model of Endophthalmitis Caused by Vancomycin-Sensitive or -Resistant Enterococcus faecalis.

Authors:  Tatsuma Kishimoto; Waka Ishida; Ken Fukuda; Isana Nakajima; Takashi Suzuki; Jumpei Uchiyama; Shigenobu Matsuzaki; Daisuke Todokoro; Masanori Daibata; Atsuki Fukushima
Journal:  Antimicrob Agents Chemother       Date:  2019-10-22       Impact factor: 5.191

4.  The interactions of bacteriophage Ace and Shiga toxin-producing Escherichia coli during biocontrol.

Authors:  Graça Pinto; Scott A Minnich; Carolyn J Hovde; Hugo Oliveira; Hauke Smidt; Carina Almeida; Joana Azeredo
Journal:  FEMS Microbiol Ecol       Date:  2021-08-03       Impact factor: 4.194

5.  Involvement of a Phage-Encoded Wzy Protein in the Polymerization of K127 Units To Form the Capsular Polysaccharide of Acinetobacter baumannii Isolate 36-1454.

Authors:  Ruth M Hall; Yuriy A Knirel; Johanna J Kenyon; Nikolay P Arbatsky; Anastasiya A Kasimova; Alexander S Shashkov; Mikhail M Shneider; Anastasiya V Popova; Dmitry A Shagin; Andrey A Shelenkov; Yuliya V Mikhailova; Yurii G Yanushevich
Journal:  Microbiol Spectr       Date:  2022-04-27

6.  Novel Acinetobacter baumannii Myovirus TaPaz Encoding Two Tailspike Depolymerases: Characterization and Host-Recognition Strategy.

Authors:  Anastasia S Shchurova; Mikhail M Shneider; Nikolay P Arbatsky; Alexander S Shashkov; Alexander O Chizhov; Yuriy P Skryabin; Yulia V Mikhaylova; Olga S Sokolova; Andrey A Shelenkov; Konstantin A Miroshnikov; Yuriy A Knirel; Anastasia V Popova
Journal:  Viruses       Date:  2021-05-25       Impact factor: 5.048

7.  Identification of Acinetobacter baumannii loci for capsular polysaccharide (KL) and lipooligosaccharide outer core (OCL) synthesis in genome assemblies using curated reference databases compatible with Kaptive.

Authors:  Kelly L Wyres; Sarah M Cahill; Kathryn E Holt; Ruth M Hall; Johanna J Kenyon
Journal:  Microb Genom       Date:  2020-03

8.  New Bacteriophages against Emerging Lineages ST23 and ST258 of Klebsiella pneumoniae and Efficacy Assessment in Galleria mellonella Larvae.

Authors:  Damien Thiry; Virginie Passet; Katarzyna Danis-Wlodarczyk; Cédric Lood; Jeroen Wagemans; Luisa De Sordi; Vera van Noort; Nicolas Dufour; Laurent Debarbieux; Jacques G Mainil; Sylvain Brisse; Rob Lavigne
Journal:  Viruses       Date:  2019-05-03       Impact factor: 5.048

9.  Complete Genome Sequence of Acinetobacter baumannii Phage BS46.

Authors:  Anastasia V Popova; Mikhail M Shneider; Yulia V Mikhailova; Andrey A Shelenkov; Dmitry A Shagin; Mikhail V Edelstein; Roman S Kozlov
Journal:  Microbiol Resour Announc       Date:  2020-05-28

10.  Characterization of a new podovirus infecting Paenibacillus larvae.

Authors:  Henrique G Ribeiro; Luís D R Melo; Hugo Oliveira; Maarten Boon; Rob Lavigne; Jean-Paul Noben; Joana Azeredo; Ana Oliveira
Journal:  Sci Rep       Date:  2019-12-30       Impact factor: 4.379

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