Literature DB >> 30461846

X-ray tomography of extended objects: a comparison of data acquisition approaches.

Ming Du, Rafael Vescovi, Kamel Fezzaa, Chris Jacobsen, Doğa Gürsoy.   

Abstract

The penetration power of x rays allows one to image large objects, while their short wavelength allows for high spatial resolution. As a result, with synchrotron sources, one has the potential to obtain tomographic images of centimeter-sized specimens with sub-micrometer pixel sizes. However, limitations on beam and detector size make it difficult to acquire such data of this sort in a single take, necessitating strategies for combining data from multiple regions. One strategy is to acquire a tiled set of local tomograms by rotating the specimen around each of the local tomogram center positions. Another strategy, sinogram oriented acquisition, involves the collection of projections at multiple offset positions from the rotation axis followed by data merging and reconstruction. We have carried out a simulation study to compare these two approaches in terms of radiation dose applied to the specimen, and reconstructed image quality. Local tomography acquisition involves an easier data alignment problem, and immediate viewing of subregions before the entire dataset has been acquired. Sinogram oriented acquisition involves a more difficult data assembly and alignment procedure, and it is more sensitive to accumulative registration error. However, sinogram oriented acquisition is more dose efficient, involves fewer translation motions of the object, and avoids certain artifacts of local tomography.

Entities:  

Year:  2018        PMID: 30461846      PMCID: PMC6994859          DOI: 10.1364/JOSAA.35.001871

Source DB:  PubMed          Journal:  J Opt Soc Am A Opt Image Sci Vis        ISSN: 1084-7529            Impact factor:   2.129


  12 in total

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4.  Hierarchical microimaging for multiscale analysis of large vascular networks.

Authors:  Stefan Heinzer; Thomas Krucker; Marco Stampanoni; Rafael Abela; Eric P Meyer; Alexandra Schuler; Philipp Schneider; Ralph Müller
Journal:  Neuroimage       Date:  2006-05-11       Impact factor: 6.556

5.  XDesign: an open-source software package for designing X-ray imaging phantoms and experiments.

Authors:  Daniel J Ching; Dogˇa Gürsoy
Journal:  J Synchrotron Radiat       Date:  2017-02-21       Impact factor: 2.616

6.  Quantitative region-of-interest tomography using variable field of view.

Authors:  J C da Silva; M Guizar-Sicairos; M Holler; A Diaz; J A van Bokhoven; O Bunk; A Menzel
Journal:  Opt Express       Date:  2018-06-25       Impact factor: 3.894

7.  Technical foundations of spiral CT.

Authors:  W A Kalender
Journal:  Semin Ultrasound CT MR       Date:  1994-04       Impact factor: 1.875

8.  High-resolution breast tomography at high energy: a feasibility study of phase contrast imaging on a whole breast.

Authors:  A Sztrókay; P C Diemoz; T Schlossbauer; E Brun; F Bamberg; D Mayr; M F Reiser; A Bravin; P Coan
Journal:  Phys Med Biol       Date:  2012-04-20       Impact factor: 3.609

9.  TomoPy: a framework for the analysis of synchrotron tomographic data.

Authors:  Dogˇa Gürsoy; Francesco De Carlo; Xianghui Xiao; Chris Jacobsen
Journal:  J Synchrotron Radiat       Date:  2014-08-01       Impact factor: 2.616

10.  Rapid alignment of nanotomography data using joint iterative reconstruction and reprojection.

Authors:  Doğa Gürsoy; Young P Hong; Kuan He; Karl Hujsak; Seunghwan Yoo; Si Chen; Yue Li; Mingyuan Ge; Lisa M Miller; Yong S Chu; Vincent De Andrade; Kai He; Oliver Cossairt; Aggelos K Katsaggelos; Chris Jacobsen
Journal:  Sci Rep       Date:  2017-09-18       Impact factor: 4.379

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  3 in total

1.  Virtual histology of archaeological human deciduous prenatal enamel through synchrotron X-ray computed microtomography images.

Authors:  Alessia Nava; Patrick Mahoney; Luca Bondioli; Alfredo Coppa; Emanuela Cristiani; Luciano Fattore; Gina McFarlane; Diego Dreossi; Lucia Mancini
Journal:  J Synchrotron Radiat       Date:  2022-01-01       Impact factor: 2.616

Review 2.  Upscaling X-ray nanoimaging to macroscopic specimens.

Authors:  Ming Du; Zichao Wendy Di; Doǧa Gürsoy; R Patrick Xian; Yevgenia Kozorovitskiy; Chris Jacobsen
Journal:  J Appl Crystallogr       Date:  2021-02-19       Impact factor: 4.868

3.  Micrometer-resolution X-ray tomographic full-volume reconstruction of an intact post-mortem juvenile rat lung.

Authors:  Elena Borisova; Goran Lovric; Arttu Miettinen; Luca Fardin; Sam Bayat; Anders Larsson; Marco Stampanoni; Johannes C Schittny; Christian M Schlepütz
Journal:  Histochem Cell Biol       Date:  2020-03-18       Impact factor: 4.304

  3 in total

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