Literature DB >> 30458204

Second update of the International Registry of HLA Epitopes. I. The HLA-ABC Epitope Database.

R J Duquesnoy1, M Marrari1, M S Marroquim2, A G Borges2, L C D da Mata Sousa2, A Socorro2, S J H do Monte3.   

Abstract

The International Registry of HLA Epitopes (http://www.epregistry.com.br) is a website-based resource for HLA epitopes important in transplant rejection and platelet transfusion refractoriness. Its primary goal is to document epitopes that are verified experimentally with specific antibodies. Such epitopes can be defined by single eplets and by eplets paired with certain polymorphic residues within a 15-Å radius, the dimension of the corresponding structural epitope. This report is an update of the HLA-ABC repertoire including descriptions of 72 antibody-verifications of epitopes defined by eplets and/or eplet pairs. The newly updated version 2.0 EpRegistry shows also the polymorphic residue compositions of structural epitopes corresponding to eplets shared between groups of alleles. At present, 151 eplets have not been antibody-verified, and we ranked them with a so-called ElliPro score as a potential predictor of immunogenicity. Sixty eplets with low ElliPro scores might be considered non-epitopes incapable of inducing specific antibodies.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 30458204     DOI: 10.1016/j.humimm.2018.11.007

Source DB:  PubMed          Journal:  Hum Immunol        ISSN: 0198-8859            Impact factor:   2.850


  8 in total

1.  Generation and reactivity analysis of human recombinant monoclonal antibodies directed against epitopes on HLA-DR.

Authors:  Cynthia S M Kramer; Marry E I Franke-van Dijk; Kim H Bakker; Merve Uyar-Mercankaya; Gonca E Karahan; Dave L Roelen; Frans H J Claas; Sebastiaan Heidt
Journal:  Am J Transplant       Date:  2020-05-15       Impact factor: 8.086

2.  Development of an immunogenicity score for HLA-DQ eplets: A conceptual study.

Authors:  Lara Schawalder; Gideon Hönger; Marc Kleiser; Michelle R van Heck; Loes A L van de Pasch; Sanne Vendelbosch; Erik H Rozemuller; Stefan Schaub
Journal:  HLA       Date:  2020-10-28       Impact factor: 4.513

3.  A Comprehensive Evaluation of the Antibody-Verified Status of Eplets Listed in the HLA Epitope Registry.

Authors:  Suzanne Bezstarosti; Kim H Bakker; Cynthia S M Kramer; Johan W de Fijter; Marlies E J Reinders; Arend Mulder; Frans H J Claas; Sebastiaan Heidt
Journal:  Front Immunol       Date:  2022-01-28       Impact factor: 7.561

4.  Improve in-depth immunological risk assessment to optimize genetic-compatibility and clinical outcomes in child and adolescent recipients of parental donor kidney transplants: protocol for the INCEPTION study.

Authors:  Wai H Lim; Brigitte Adams; Stephen Alexander; Antonia H M Bouts; Frans Claas; Michael Collins; Elisabeth Cornelissen; Heather Dunckley; Huib de Jong; Lloyd D'Orsogna; Anna Francis; Sebastiaan Heidt; Jean Herman; Rhonda Holdsworth; Joshua Kausman; Rabia Khalid; Jon Jin Kim; Siah Kim; Noël Knops; Vasilis Kosmoliaptsis; Cynthia Kramer; Dirk Kuypers; Nicholas Larkins; Suetonia C Palmer; Chanel Prestidge; Agnieszka Prytula; Ankit Sharma; Meena Shingde; Anne Taverniti; Armando Teixeira-Pinto; Peter Trnka; Francis Willis; Daniel Wong; Germaine Wong
Journal:  BMC Nephrol       Date:  2021-12-19       Impact factor: 2.388

5.  Snowflake: A deep learning-based human leukocyte antigen matching algorithm considering allele-specific surface accessibility.

Authors:  Matthias Niemann; Benedict M Matern; Eric Spierings
Journal:  Front Immunol       Date:  2022-07-29       Impact factor: 8.786

6.  HLA-EPI: A new EPIsode in exploring donor/recipient epitopic compatibilities.

Authors:  Estelle Geffard; Léo Boussamet; Alexandre Walencik; Florent Delbos; Sophie Limou; Pierre-Antoine Gourraud; Nicolas Vince
Journal:  HLA       Date:  2021-12-16       Impact factor: 8.762

7.  HLA-EMMA: A user-friendly tool to analyse HLA class I and class II compatibility on the amino acid level.

Authors:  Cynthia S M Kramer; Johan Koster; Geert W Haasnoot; Dave L Roelen; Frans H J Claas; Sebastiaan Heidt
Journal:  HLA       Date:  2020-04-13       Impact factor: 4.513

8.  HLA-DQ-Specific Recombinant Human Monoclonal Antibodies Allow for In-Depth Analysis of HLA-DQ Epitopes.

Authors:  Suzanne Bezstarosti; Cynthia S M Kramer; Marry E I Franke-van Dijk; Manon Vergunst; Kim H Bakker; Merve Uyar-Mercankaya; Rico Buchli; Dave L Roelen; Johan W de Fijter; Frans H J Claas; Sebastiaan Heidt
Journal:  Front Immunol       Date:  2022-01-07       Impact factor: 7.561

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.