Literature DB >> 30447507

Function first: classifying cell types and circuits of the retina.

Anna L Vlasits1, Thomas Euler2, Katrin Franke3.   

Abstract

Cell type classification has been a major part of retina research for over one hundred years. In recent years, the ability to sample large populations of retinal cells has accelerated cell type classification based on different criteria like genetics, morphology, function, and circuitry. For example, recent work includes bipolar and retinal ganglion cell classifications based on single-cell transcriptomes, large-scale electron microscopy reconstruction, and population-level functional imaging. With comprehensive descriptions of several retinal cell classes now within reach, it is important to reflect on the priority of these different criteria to create an accurate and useful classification. Here, we argue that functional information about retinal cells should be prioritized over other criteria when addressing questions of visual function because this criterion provides the most meaningful information about how the retina works.
Copyright © 2018 Elsevier Ltd. All rights reserved.

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Year:  2018        PMID: 30447507     DOI: 10.1016/j.conb.2018.10.011

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  10 in total

Review 1.  Voltage- and calcium-gated ion channels of neurons in the vertebrate retina.

Authors:  Matthew J Van Hook; Scott Nawy; Wallace B Thoreson
Journal:  Prog Retin Eye Res       Date:  2019-05-10       Impact factor: 21.198

2.  Network Architecture of Gap Junctional Coupling among Parallel Processing Channels in the Mammalian Retina.

Authors:  Crystal L Sigulinsky; James R Anderson; Ethan Kerzner; Christopher N Rapp; Rebecca L Pfeiffer; Taryn M Rodman; Daniel P Emrich; Kevin D Rapp; Noah T Nelson; J Scott Lauritzen; Miriah Meyer; Robert E Marc; Bryan W Jones
Journal:  J Neurosci       Date:  2020-04-24       Impact factor: 6.167

Review 3.  Understanding the retinal basis of vision across species.

Authors:  Tom Baden; Thomas Euler; Philipp Berens
Journal:  Nat Rev Neurosci       Date:  2019-11-28       Impact factor: 34.870

4.  Molecular classification of zebrafish retinal ganglion cells links genes to cell types to behavior.

Authors:  Yvonne Kölsch; Joshua Hahn; Anna Sappington; Manuel Stemmer; António M Fernandes; Thomas O Helmbrecht; Shriya Lele; Salwan Butrus; Eva Laurell; Irene Arnold-Ammer; Karthik Shekhar; Joshua R Sanes; Herwig Baier
Journal:  Neuron       Date:  2020-12-23       Impact factor: 17.173

5.  Gap Junction Coupling Shapes the Encoding of Light in the Developing Retina.

Authors:  Franklin Caval-Holme; Yizhen Zhang; Marla B Feller
Journal:  Curr Biol       Date:  2019-11-07       Impact factor: 10.900

Review 6.  Neurogenesis and Specification of Retinal Ganglion Cells.

Authors:  Kim Tuyen Nguyen-Ba-Charvet; Alexandra Rebsam
Journal:  Int J Mol Sci       Date:  2020-01-10       Impact factor: 5.923

7.  Probe-Seq enables transcriptional profiling of specific cell types from heterogeneous tissue by RNA-based isolation.

Authors:  Ryoji Amamoto; Mauricio D Garcia; Emma R West; Jiho Choi; Sylvain W Lapan; Elizabeth A Lane; Norbert Perrimon; Constance L Cepko
Journal:  Elife       Date:  2019-12-09       Impact factor: 8.140

8.  Predicting synchronous firing of large neural populations from sequential recordings.

Authors:  Oleksandr Sorochynskyi; Stéphane Deny; Olivier Marre; Ulisse Ferrari
Journal:  PLoS Comput Biol       Date:  2021-01-28       Impact factor: 4.475

Review 9.  Retinal Ganglion Cells-Diversity of Cell Types and Clinical Relevance.

Authors:  Ungsoo Samuel Kim; Omar A Mahroo; John D Mollon; Patrick Yu-Wai-Man
Journal:  Front Neurol       Date:  2021-05-21       Impact factor: 4.003

10.  Mouse Lines with Cre-Mediated Recombination in Retinal Amacrine Cells.

Authors:  Didem Göz Aytürk; Wenjia You; Constance L Cepko
Journal:  eNeuro       Date:  2022-02-14
  10 in total

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