| Literature DB >> 30445752 |
Liang Zhao1,2, Zhigang Liu3,4,5, Shan Xu6,7, Xue He8,9, Zhuoya Ni10, Huarong Zhao11, Sanxue Ren12.
Abstract
The fraction of absorbed photosynthetically active radiation (FPAR) is a key variable in the model of vegetation productivity. Vegetation indices (VIs) that were derived from instantaneous remote-sensing data have been successfully used to estimate the FPAR of a day or a longer period. However, it has not yet been verified whether continuous VIs can be used to accurately estimate the diurnal dynamics of a vegetation canopy FPAR, which may fluctuate dramatically within a day. In this study, we measured the high temporal resolution spectral data (480 to 850 nm) and FPAR data of a maize canopy from the jointing stage to the tasseling stage under different irrigation and illumination conditions using two automatic observation systems. To estimate the FPAR, we developed regression models based on a quadratic function using 13 kinds of VIs. The results show the following: (1) Under nondrought conditions, although the illumination condition (sunny or cloudy) influenced the trend of the canopy diurnal FPAR, it had only a slight effect on the model accuracies of the FPAR-VIs. The maximum coefficients of determination (R²) of the FPAR-VIs models generated for the sunny nondrought data, the cloudy nondrought data, and all of the nondrought data were 0.895, 0.88, and 0.828, respectively. The VIs-including normalized difference vegetation index (NDVI), green NDVI (GNDVI), red-edge simple ratio (SR705), modified simple ratio 2 (mSR2), red-edge normalized difference vegetation index (NDVI705), and enhanced vegetation index (EVI)-that were related to the canopy structure had higher estimation accuracies (R² > 0.8) than the other VIs that were related to the soil adjustment, chlorophyll, and physiology. The estimation accuracies of the GNDVI and some red-edge VIs (including NDVI705, SR705, and mSR2) were higher than the estimation accuracy of the NDVI. (2) Under drought stress, the FPAR decreased significantly because of leaf wilting and the effective leaf area index decrease around noon. When we included drought data in the model, accuracies were reduced dramatically and the R² value of the best model was only 0.59. When we built the regression models based only on drought data, the EVI, which can weaken the influence of soil, had the best estimate accuracy (R² = 0.68).Entities:
Keywords: FPAR; diurnal dynamics; drought; maize; vegetation index
Mesh:
Substances:
Year: 2018 PMID: 30445752 PMCID: PMC6263481 DOI: 10.3390/s18113965
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1Automatic observation diagram of the FPAR.
Definitions of the vegetation indices (VIs) evaluated in this study.
| Name | Index | Formulation |
|---|---|---|
| Re-normalized difference vegetation index | RDVI | (R800 − R670)/( |
| Enhanced vegetation index | EVI | 2.5 × (R800 − R690)/(R800 + 6.0 × R690 − 7.5 × R490) |
| Green normalized difference vegetation index | GNDVI | (R800 − R550)/(R800 + R550) |
| Modified soil-adjusted vegetation index | MSAVI | (2 × R800 + 1 − |
| Normalized difference vegetation index | NDVI | (R800 − R670)/(R800 + R670) |
| Red-edge simple ratio | SR705 | R750/R705 |
| Modified simple ratio 2 | mSR2 | (R750/R705 − 1)/( |
| Red-edge normalized difference vegetation index | NDVI705 | (R750 − R705)/(R750 + R705) |
| Optimal soil-adjusted vegetation index | OSAVI | (1 + 0.16) × (R800 − R670)/(R800 + R670 + 0.16) |
| Red-edge re-normalized difference vegetation index | RDVI705 | (R800 − R705)/( |
| Red-edge transformed chlorophyll absorption in reflectance index | TCARI705 | 3 × [(R750 − R705) − 0.2 × (R750 − R550) × (R750/R705)] |
| Modified chlorophyll absorption in reflectance index | MCARI | ((R700 − R670) − 0.2 × (R700 − R550)) × (R700/R670) |
| Photochemical reflectance index | PRI | (R531 − R570)/(R531 + R570) |
Weight moisture capacity (WMC) and relative moisture content (RMC) at different depths (Irrigation was carried out on the nights of 14 July and 30 July).
| Depth (cm) | 16 July | 30 July | 1 August | |||
|---|---|---|---|---|---|---|
| WMC | RMC | WMC | RMC | WMC | RMC | |
| 0~5 | 14.3 | 58.23% | 3.0 | 36.92% | 14.4 | 56.83% |
| 5~10 | 13.7 | 6.2 | 14.1 | |||
| 10~20 | 12.7 | 8.9 | 14.6 | |||
| 20~30 | 10.2 | 9.1 | 8.3 | |||
| 30~40 | 15.3 | 14.7 | 13.1 | |||
| 40~50 | 16.7 | 16.5 | 15.4 | |||
| 50~60 | 17.3 | 69.34% | 17.0 | 69.02% | 14.4 | 62.63% |
| 60~70 | 15.9 | 16.1 | 13.8 | |||
| 70~80 | 15.1 | 15.0 | 13.5 | |||
| 80~90 | 14.2 | 13.8 | 13.9 | |||
| 90~100 | 15.2 | 15.6 | 14.3 | |||
The average effective LAI values on different days.
| Date | Effective LAI | Weather | Date | Effective LAI | Weather |
|---|---|---|---|---|---|
| 18 July 2017 | 2.65 | Sunny | 29 July 2017 | 2.08 | Sunny |
| 19 July 2017 | 2.4 | Sunny | 30 July 2017 | 2.12 | Sunny |
| 20 July 2017 | 2.21 | Cloudy | 31 July 2017 | 2.56 | Sunny |
| 27 July 2017 | 2.46 | Cloudy | 1 August 2017 | 3.31 | Sunny |
| 28 July 2017 | 2.28 | Cloudy | 3 August, 2017 | 2.99 | Sunny |
Figure 2Diurnal FPAR, NDVI, and PAR during (a) a cloudy day without drought stress, (b) a sunny day with drought stress, and (c) a sunny day without drought stress.
Regression equations between the FPAR (y) and VIs (x) on sunny days and cloudy days without drought stress.
| Cloudy Nondrought Days | Sunny Nondrought Days | ||||||
|---|---|---|---|---|---|---|---|
| VIs | Formula | R2 | RMSE | VIs | Formula | R2 | RMSE |
| GNDVI | y = 35.3025x2 − 54.0546x + 21.4547 | 0.880 | 0.014 | mSR2 | y = −0.0506x2 + 0.5376x − 0.0347 | 0.895 | 0.015 |
| SR705 | y = 0.0227x2 − 0.2325x + 1.3599 | 0.873 | 0.014 | SR705 | y = −0.0073x2 + 0.1723x + 0.0288 | 0.895 | 0.014 |
| mSR2 | y = 0.4326x2 − 1.4608x + 1.9994 | 0.872 | 0.014 | GNDVI | y = −6.435x2 + 12.8143x − 5.301 | 0.889 | 0.015 |
| NDVI705 | y = 16.9178x2 − 22.9836x + 8.5701 | 0.867 | 0.014 | NDVI | y = 23.2133X2 − 39.6909x + 17.6786 | 0.889 | 0.015 |
| NDVI | y = 24.69x2 + −43.4435x + 19.8771 | 0.844 | 0.016 | NDVI705 | y = 6.0087x2 − 6.5581x + 2.4183 | 0.888 | 0.015 |
| EVI | y = 2.4251x2 − 9.9697x + 11.0135 | 0.833 | 0.016 | EVI | y = 2.2449x2 − 8.8946x + 9.5286 | 0.857 | 0.017 |
| TCARI705 | y = 0.0033x2 − 0.0244x + 0.8056 | 0.799 | 0.018 | TCARI705 | y = −0.0022x2 + 0.0618x + 0.4854 | 0.626 | 0.028 |
| MSAVI | y = 6.5224x2 − 10.4731x + 4.9721 | 0.789 | 0.018 | MSAVI | y = 2.0351x2 − 2.4975x + 1.4337 | 0.611 | 0.028 |
| OSAVI | y = 9.2741x2 − 14.9208x + 6.7686 | 0.771 | 0.019 | OSAVI | y = −1.8846x2 + 4.5102x − 1.6842 | 0.568 | 0.030 |
| RDVI705 | y = 3.7319x2 − 4.1813x + 1.9315 | 0.765 | 0.019 | RDVI705 | y = −2.6621x2 + 4.2621x − 0.8434 | 0.473 | 0.033 |
| PRI | y = 51.7959x2 + 1.2097x + 0.775 | 0.756 | 0.020 | RDVI | y = −3.3692x2 + 5.7419x − 1.6118 | 0.384 | 0.036 |
| RDVI | y = 3.0198x2 − 3.9242x + 2.0366 | 0.713 | 0.021 | PRI | y = −40.9556x2 + 3.5204x + 0.7674 | 0.363 | 0.036 |
| MCARI | y = 1.11x2 + 1.7204x + 0.6741 | 0.595 | 0.025 | MCARI | y = −73.7611x2 + 13.8129x + 0.1759 | 0.360 | 0.036 |
Regression equations between the FPAR (y) and VIs (x) for three different kinds of conditions.
| 18 July to 3 August (All Days) | 18 July to 3 August (Nondrought Days) | 18 July to 3 August (Drought Days) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| VIs | Formula | R2 | RMSE | VIs | Formula | R2 | RMSE | VIs | Formula | R2 | RMSE |
| GNDVI | y = 4.9269x2 − 6.1141x + 2.5617 | 0.590 | 0.036 | GNDVI | y = 10.201x2 − 13.8935x + 5.4054 | 0.828 | 0.018 | EVI | y = −0.3955x2 + 1.833x − 1.2591 | 0.685 | 0.044 |
| SR705 | y = 0.0034x2 + 0.0038x + 0.658 | 0.549 | 0.038 | NDVI705 | y = 7.51x2 − 9.189x + 3.5267 | 0.813 | 0.018 | NDVI | y = −7.5738x2 + 14.2627x − 5.8525 | 0.654 | 0.046 |
| mSR2 | y = 0.073x2 − 0.0915x + 0.7175 | 0.547 | 0.038 | NDVI | y = 24.4468x2 − 42.6451x + 19.3503 | 0.811 | 0.019 | GNDVI | y = −12.0055x2 + 19.859x − 7.3489 | 0.653 | 0.046 |
| NDVI705 | y = 2.7775x2 − 2.8914x + 1.4561 | 0.536 | 0.039 | mSR2 | y = 0.0852x2 − 0.0673x + 0.6179 | 0.807 | 0.019 | NDVI705 | y = −4.2147x2 + 6.4723x − 1.6216 | 0.645 | 0.046 |
| EVI | y = 0.281x2 − 0.8641x + 1.3689 | 0.500 | 0.040 | SR705 | y = 0.0011x2 + 0.0483x + 0.4642 | 0.805 | 0.019 | mSR2 | y = −0.1857x2 + 0.8028x − 0.0022 | 0.621 | 0.048 |
| NDVI | y = 3.8763x2 − 5.7719x + 2.8513 | 0.495 | 0.040 | EVI | y = 2.6888x2 − 11.011x + 12.0306 | 0.790 | 0.019 | SR705 | y = −0.0129x2 + 0.1845x + 0.2076 | 0.602 | 0.049 |
| TCARI705 | y = 0.0006x2 + 0.0124x + 0.7002 | 0.427 | 0.043 | TCARI705 | y = 0.0007x2 + 0.0159x + 0.6604 | 0.662 | 0.025 | PRI | y = −34.9698x2 + 0.8984x + 0.8607 | 0.580 | 0.050 |
| MSAVI | y = 1.7611x2 − 2.3618x + 1.5346 | 0.398 | 0.044 | MSAVI | y = 5.0591x2 − 7.8632x + 3.8112 | 0.658 | 0.025 | OSAVI | y = −5.0779x2 + 8.9373x − 3.0722 | 0.522 | 0.054 |
| OSAVI | y = 2.0062x2 − 2.6163x + 1.5778 | 0.395 | 0.044 | OSAVI | y = 5.6676x2 − 8.6318x + 4.0299 | 0.624 | 0.026 | TCARI705 | y = −0.0037x2 + 0.0641x + 0.595 | 0.481 | 0.057 |
| RDVI705 | y = 0.8962x2 − 0.5841x + 0.8075 | 0.378 | 0.045 | RDVI705 | y = 0.6643x2 − 0.1069x + 0.586 | 0.581 | 0.028 | MSAVI | y = −1.785x2 + 3.2967x − 0.663 | 0.461 | 0.057 |
| RDVI | y = 0.8471x2 − 0.7532x + 0.8937 | 0.325 | 0.047 | PRI | y = 42.5846x2 + 1.5045x + 0.7736 | 0.506 | 0.030 | RDVI705 | y = −2.8878x2 + 4.0519x − 0.5601 | 0.459 | 0.058 |
| PRI | y = 6.8559x2 + 1.5202x + 0.7968 | 0.322 | 0.047 | RDVI | y = 0.6001x2 − 0.2575x + 0.6511 | 0.500 | 0.030 | RDVI | y = −2.5379x2 + 4.0916x − 0.7887 | 0.410 | 0.060 |
| MCARI | y = 5.9394x2 + 0.6518x + 0.7253 | 0.216 | 0.050 | MCARI | y = 4.0202x2 + 1.1067x + 0.693 | 0.375 | 0.034 | MCARI | y = −26.3964x2 + 5.7026x + 0.5679 | 0.242 | 0.068 |
Figure 3Measured FPAR and predicted FPAR of four models for (a) a cloudy nondrought day, (b) a sunny drought day, and (c) a sunny nondrought day.
The RMSE values for the predicted FPAR and the measured FPAR.
| All-GNDVI | ND-GNDVI | D-EVI | CND-GNDVI | |
|---|---|---|---|---|
|
| 0.033 | 0.020 | 0.085 | 0.017 |
|
| 0.063 | 0.075 | 0.049 | 0.134 |
|
| 0.031 | 0.034 | 0.034 | 0.044 |