Literature DB >> 30445031

Long interspersed nucleotide element-1 (LINE-1) methylation in colorectal cancer.

Mohammad Amin Kerachian1, Matin Kerachian2.   

Abstract

Colorectal cancer (CRC) represents a group of molecularly heterogeneous diseases characterized by genetic and epigenetic alterations. Long interspersed nuclear elements (LINEs) are a form of retrotransposable element found in many eukaryotic genomes. These LINEs, when active, can mobilize in the cell and steadily cause genomic rearrangement. Active LINE reorganization is a source of endogenous mutagenesis and polymorphism in the cell that brings about individual genomic variation. In normal somatic cells, these elements are heavily methylated and thus mostly suppressed, in turn, preventing their potential for bringing about genomic instability. When LINEs are inadequately controlled, they can play a role in the pathogenesis of several genetic diseases, such as cancer. In tumor cells, LINE hypomethylation can reactivate the mobilization of these elements and is associated with both an advanced stage and a poor prognosis. In this article, we summarize the current knowledge surrounding LINE methylation, its correlation to CRC and its application as a diagnostic, prognostic and predictive biomarker in colon cancer.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cancer; Colon; LINE; Long interspersed nucleotide element-1; Methylation; SINE; SVA

Mesh:

Substances:

Year:  2018        PMID: 30445031     DOI: 10.1016/j.cca.2018.11.018

Source DB:  PubMed          Journal:  Clin Chim Acta        ISSN: 0009-8981            Impact factor:   3.786


  12 in total

1.  MS-HRM protocol: a simple and low-cost approach for technical validation of next-generation methylation sequencing data.

Authors:  Ali Javadmanesh; Afsaneh Mojtabanezhad Shariatpanahi; Ehsan Shams Davodly; Marjan Azghandi; Maryam Yassi; Mehdi Heidari; Matin Kerachian; Mohammad Amin Kerachian
Journal:  Mol Genet Genomics       Date:  2022-05-26       Impact factor: 3.291

2.  Genomic instability genes in lung and colon adenocarcinoma indicate organ specificity of transcriptomic impact on Copy Number Alterations.

Authors:  Chinthalapally V Rao; Chao Xu; Yuting Zhang; Adam S Asch; Hiroshi Y Yamada
Journal:  Sci Rep       Date:  2022-07-11       Impact factor: 4.996

3.  Standardization of DNA amount for bisulfite conversion for analyzing the methylation status of LINE-1 in lung cancer.

Authors:  Duong Anh Thuy Pham; Son Duc Le; Trang Mai Doan; Phuong Thu Luu; Uyen Quynh Nguyen; Son Van Ho; Lan Thi Thuong Vo
Journal:  PLoS One       Date:  2021-08-17       Impact factor: 3.240

4.  A comparative study of long interspersed element-1 protein immunoreactivity in cutaneous malignancies.

Authors:  Mohammad Ali Zolfaghari; Abbas Karimi; Elham Kalantari; Alireza Korourian; Alireza Ghanadan; Kambiz Kamyab; Nafiseh Esmaili; Amir Nader Emami Razavi; Zahra Madjd
Journal:  BMC Cancer       Date:  2020-06-17       Impact factor: 4.430

5.  Expression of tumor pyruvate kinase M2 isoform in plasma and stool of patients with colorectal cancer or adenomatous polyps.

Authors:  Farideh Rigi; Aliakbar Jannatabad; Azra Izanloo; Reza Roshanravan; Hamid Reza Hashemian; Mohammad Amin Kerachian
Journal:  BMC Gastroenterol       Date:  2020-07-29       Impact factor: 3.067

6.  DNA methylation changes that precede onset of dysplasia in advanced sessile serrated adenomas.

Authors:  Cheng Liu; Lochlan J Fennell; Mark L Bettington; Neal I Walker; Joel Dwine; Barbara A Leggett; Vicki L J Whitehall
Journal:  Clin Epigenetics       Date:  2019-06-14       Impact factor: 6.551

7.  Impact of Tumor LINE-1 Methylation Level and Neoadjuvant Treatment and Its Association with Colorectal Cancer Survival.

Authors:  Hatim Boughanem; Gracia María Martin-Nuñez; Esperanza Torres; Isabel Arranz-Salas; Julia Alcaide; Sonsoles Morcillo; Francisco J Tinahones; Ana B Crujeiras; Manuel Macias-Gonzalez
Journal:  J Pers Med       Date:  2020-11-11

Review 8.  Role of aldo-keto reductase family 1 member B1 (AKR1B1) in the cancer process and its therapeutic potential.

Authors:  Reza Khayami; Seyyed Reza Hashemi; Mohammad Amin Kerachian
Journal:  J Cell Mol Med       Date:  2020-07-06       Impact factor: 5.310

Review 9.  Novel Methylation Biomarkers for Colorectal Cancer Prognosis.

Authors:  Alvaro Gutierrez; Hannah Demond; Priscilla Brebi; Carmen Gloria Ili
Journal:  Biomolecules       Date:  2021-11-19

10.  Crosstalk Between DNA Methylation and Gene Mutations in Colorectal Cancer.

Authors:  Maria Dobre; Alessandro Salvi; Iulia Andreea Pelisenco; Florina Vasilescu; Giuseppina De Petro; Vlad Herlea; Elena Milanesi
Journal:  Front Oncol       Date:  2021-07-01       Impact factor: 6.244

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