Literature DB >> 30443851

Comparative analysis of root transcriptome profiles between low- and high-cadmium-accumulating genotypes of wheat in response to cadmium stress.

Min Zhou1,2, Shigang Zheng1, Rong Liu1,2, Jing Lu1,2, Lu Lu1, Chihong Zhang1, Zehou Liu1, Congpei Luo1,2, Lei Zhang3, Yu Wu4.   

Abstract

Wheat, one of the most broadly cultivated and consumed food crops worldwide, can accumulate high Cd contents in their edible parts, which poses a major hazard to human health. Cd accumulation ability differs among varieties in wheat, but the underlying molecular mechanism is largely unknown. Here, key genes responsible for Cd accumulation between two contrasting wheat genotypes (low-Cd accumulation one L17, high-Cd accumulation one H17) were investigated. Total 1269 were differentially expressed genes (DEGs) in L17 after Cd treatment, whereas, 399 Cd-induced DEGs were found in H17. GO-GO network analysis showed that heme binding was the most active GO, and metal binding was the second one that associated with other GOs in response to Cd stress in both genotypes. Pathway-pathway network analysis showed that phenylpronanoid biosynthesis and glutathione metabolism were the top pathways in response to Cd stress in both genotypes. Furthermore, we found that DEGs related to ion binding, antioxidant defense mechanisms, sulfotransferase activity, and cysteine biosynthetic process were more enriched in L17. In conclusion, our results not only provide the foundation for further exploring the molecular mechanism of Cd accumulation in wheat but also supply new strategies for improving phytoremediation ability of wheat by genetic engineering.

Entities:  

Keywords:  Cadmium; GO-GO network; Pathway-pathway network; RNA sequencing; Wheat

Mesh:

Substances:

Year:  2018        PMID: 30443851     DOI: 10.1007/s10142-018-0646-4

Source DB:  PubMed          Journal:  Funct Integr Genomics        ISSN: 1438-793X            Impact factor:   3.410


  33 in total

Review 1.  Genome-wide transcriptome profiling of the early cadmium response of Arabidopsis roots and shoots.

Authors:  S Herbette; L Taconnat; V Hugouvieux; L Piette; M-L M Magniette; S Cuine; P Auroy; P Richaud; C Forestier; J Bourguignon; J-P Renou; A Vavasseur; N Leonhardt
Journal:  Biochimie       Date:  2006-06-06       Impact factor: 4.079

2.  Identification of barley genotypes with low grain Cd accumulation and its interaction with four microelements.

Authors:  Fei Chen; Jing Dong; Fang Wang; Feibo Wu; Guoping Zhang; Guoming Li; Zhefeng Chen; Jingxing Chen; Kang Wei
Journal:  Chemosphere       Date:  2007-01-25       Impact factor: 7.086

3.  Combining proteomics and metabolite analyses to unravel cadmium stress-response in poplar leaves.

Authors:  Pol Kieffer; Sébastien Planchon; Mouhssin Oufir; Johanna Ziebel; Jacques Dommes; Lucien Hoffmann; Jean-François Hausman; Jenny Renaut
Journal:  J Proteome Res       Date:  2009-01       Impact factor: 4.466

Review 4.  The co-evolution of phytoplankton and trace element cycles in the oceans.

Authors:  François M M Morel
Journal:  Geobiology       Date:  2008-06       Impact factor: 4.407

5.  Environmental exposure to cadmium and risk of cancer: a prospective population-based study.

Authors:  Tim Nawrot; Michelle Plusquin; Janneke Hogervorst; Harry A Roels; Hilde Celis; Lutgarde Thijs; Jaco Vangronsveld; Etienne Van Hecke; Jan A Staessen
Journal:  Lancet Oncol       Date:  2006-02       Impact factor: 41.316

Review 6.  Cadmium: cellular effects, modifications of biomolecules, modulation of DNA repair and genotoxic consequences (a review).

Authors:  G Bertin; D Averbeck
Journal:  Biochimie       Date:  2006-10-17       Impact factor: 4.079

Review 7.  Recent developments in the application of proteomics to the analysis of plant responses to heavy metals.

Authors:  Nagib Ahsan; Jenny Renaut; Setsuko Komatsu
Journal:  Proteomics       Date:  2009-05       Impact factor: 3.984

8.  Comprehensive analysis of the Brassica juncea root proteome in response to cadmium exposure by complementary proteomic approaches.

Authors:  Sophie Alvarez; Bertram M Berla; Jeanne Sheffield; Rebecca E Cahoon; Joseph M Jez; Leslie M Hicks
Journal:  Proteomics       Date:  2009-05       Impact factor: 3.984

9.  KEGG for linking genomes to life and the environment.

Authors:  Minoru Kanehisa; Michihiro Araki; Susumu Goto; Masahiro Hattori; Mika Hirakawa; Masumi Itoh; Toshiaki Katayama; Shuichi Kawashima; Shujiro Okuda; Toshiaki Tokimatsu; Yoshihiro Yamanishi
Journal:  Nucleic Acids Res       Date:  2007-12-12       Impact factor: 16.971

10.  Cadmium uptake and translocation in seedlings of near isogenic lines of durum wheat that differ in grain cadmium accumulation.

Authors:  Neil S Harris; Gregory J Taylor
Journal:  BMC Plant Biol       Date:  2004-04-14       Impact factor: 4.215

View more
  5 in total

1.  Physiological and Transcriptomic Comparison of Two Sunflower (Helianthus annuus L.) Cultivars With High/Low Cadmium Accumulation.

Authors:  Yuanzhi Fu; Halyna Zhatova; Yuqing Li; Qiao Liu; Volodymyr Trotsenko; Chengqi Li
Journal:  Front Plant Sci       Date:  2022-05-09       Impact factor: 6.627

2.  Comparative Analysis of Italian Lettuce (Lactuca sativa L. var. ramose) Transcriptome Profiles Reveals the Molecular Mechanism on Exogenous Melatonin Preventing Cadmium Toxicity.

Authors:  Xuena Yu; Le Liang; Yongdong Xie; Yi Tang; Huaqiang Tan; Jianwei Zhang; Lijin Lin; Bo Sun; Zhi Huang; Ji Liu; Xiaomei Li; Lihua Tu; Huanxiu Li
Journal:  Genes (Basel)       Date:  2022-05-26       Impact factor: 4.141

3.  Genome-wide identification, phylogenetic and expression analysis of the heat shock transcription factor family in bread wheat (Triticum aestivum L.).

Authors:  Min Zhou; Shigang Zheng; Rong Liu; Jing Lu; Lu Lu; Chihong Zhang; Zehou Liu; Congpei Luo; Lei Zhang; Levi Yant; Yu Wu
Journal:  BMC Genomics       Date:  2019-06-18       Impact factor: 3.969

Review 4.  Recent Advances in Minimizing Cadmium Accumulation in Wheat.

Authors:  Min Zhou; Zhengguo Li
Journal:  Toxics       Date:  2022-04-12

Review 5.  Advances in "Omics" Approaches for Improving Toxic Metals/Metalloids Tolerance in Plants.

Authors:  Ali Raza; Javaria Tabassum; Zainab Zahid; Sidra Charagh; Shanza Bashir; Rutwik Barmukh; Rao Sohail Ahmad Khan; Fernando Barbosa; Chong Zhang; Hua Chen; Weijian Zhuang; Rajeev K Varshney
Journal:  Front Plant Sci       Date:  2022-01-04       Impact factor: 5.753

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.