Literature DB >> 30443437

Representation of Deep Features using Radiologist defined Semantic Features.

Rahul Paul1, Ying Liu2, Qian Li2, Lawrence Hall1, Dmitry Goldgof1, Yoganand Balagurunathan3, Matthew Schabath4, Robert Gillies3.   

Abstract

Semantic features are common radiological traits used to characterize a lesion by a trained radiologist. These features have been recently formulated, quantified on a point scale in the context of lung nodules by our group. Certain radiological semantic traits have been shown to extremely predictive of malignancy [26]. Semantic traits observed by a radiologist at examination describe the nodules and the morphology of the lung nodule shape, size, border, attachment to vessel or pleural wall, location and texture etc. Deep features are numeric descriptors often obtained from a convolutional neural network (CNN) which are widely used for classification and recognition. Deep features may contain information about texture and shape, primarily. Lately, with the advancement of deep learning, convolutional neural networks (CNN) are also being used to analyze lung nodules. In this study, we relate deep features to semantic features by looking for similarity in ability to classify. Deep features were obtained using a transfer learning approach from both an ImageNet pre-trained CNN and our trained CNN architecture. We found that some of the semantic features can be represented by one or more deep features. In this process, we can infer that some deep feature(s) have similar discriminatory ability as semantic features.

Entities:  

Keywords:  Convolutional neural network; deep features; semantic features

Year:  2018        PMID: 30443437      PMCID: PMC6233304          DOI: 10.1109/IJCNN.2018.8489440

Source DB:  PubMed          Journal:  Proc Int Jt Conf Neural Netw        ISSN: 2161-4407


  11 in total

1.  Guidelines for Management of Incidental Pulmonary Nodules Detected on CT Images: From the Fleischner Society 2017.

Authors:  Heber MacMahon; David P Naidich; Jin Mo Goo; Kyung Soo Lee; Ann N C Leung; John R Mayo; Atul C Mehta; Yoshiharu Ohno; Charles A Powell; Mathias Prokop; Geoffrey D Rubin; Cornelia M Schaefer-Prokop; William D Travis; Paul E Van Schil; Alexander A Bankier
Journal:  Radiology       Date:  2017-02-23       Impact factor: 11.105

2.  Comparison Between Radiological Semantic Features and Lung-RADS in Predicting Malignancy of Screen-Detected Lung Nodules in the National Lung Screening Trial.

Authors:  Qian Li; Yoganand Balagurunathan; Ying Liu; Jin Qi; Matthew B Schabath; Zhaoxiang Ye; Robert J Gillies
Journal:  Clin Lung Cancer       Date:  2017-10-13       Impact factor: 4.785

3.  Radiologic Features of Small Pulmonary Nodules and Lung Cancer Risk in the National Lung Screening Trial: A Nested Case-Control Study.

Authors:  Ying Liu; Hua Wang; Qian Li; Melissa J McGettigan; Yoganand Balagurunathan; Alberto L Garcia; Zachary J Thompson; John J Heine; Zhaoxiang Ye; Robert J Gillies; Matthew B Schabath
Journal:  Radiology       Date:  2017-08-24       Impact factor: 11.105

4.  Reduced lung-cancer mortality with low-dose computed tomographic screening.

Authors:  Denise R Aberle; Amanda M Adams; Christine D Berg; William C Black; Jonathan D Clapp; Richard M Fagerstrom; Ilana F Gareen; Constantine Gatsonis; Pamela M Marcus; JoRean D Sicks
Journal:  N Engl J Med       Date:  2011-06-29       Impact factor: 91.245

5.  Effect of emphysema on lung cancer risk in smokers: a computed tomography-based assessment.

Authors:  Yan Li; Stephen J Swensen; Leman Günbey Karabekmez; Randolph S Marks; Shawn M Stoddard; Ruoxiang Jiang; Joel B Worra; Fang Zhang; David E Midthun; Mariza de Andrade; Yong Song; Ping Yang
Journal:  Cancer Prev Res (Phila)       Date:  2010-11-30

6.  Cancer statistics, 2015.

Authors:  Rebecca L Siegel; Kimberly D Miller; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2015-01-05       Impact factor: 508.702

7.  Radiological Image Traits Predictive of Cancer Status in Pulmonary Nodules.

Authors:  Ying Liu; Yoganand Balagurunathan; Thomas Atwater; Sanja Antic; Qian Li; Ronald C Walker; Gary T Smith; Pierre P Massion; Matthew B Schabath; Robert J Gillies
Journal:  Clin Cancer Res       Date:  2016-09-23       Impact factor: 12.531

8.  CT Features Associated with Epidermal Growth Factor Receptor Mutation Status in Patients with Lung Adenocarcinoma.

Authors:  Ying Liu; Jongphil Kim; Fangyuan Qu; Shichang Liu; Hua Wang; Yoganand Balagurunathan; Zhaoxiang Ye; Robert J Gillies
Journal:  Radiology       Date:  2016-03-03       Impact factor: 11.105

9.  Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer.

Authors:  Stephen S F Yip; Ying Liu; Chintan Parmar; Qian Li; Shichang Liu; Fangyuan Qu; Zhaoxiang Ye; Robert J Gillies; Hugo J W L Aerts
Journal:  Sci Rep       Date:  2017-06-14       Impact factor: 4.379

10.  Differences in Patient Outcomes of Prevalence, Interval, and Screen-Detected Lung Cancers in the CT Arm of the National Lung Screening Trial.

Authors:  Matthew B Schabath; Pierre P Massion; Zachary J Thompson; Steven A Eschrich; Yoganand Balagurunathan; Dmitry Goldof; Denise R Aberle; Robert J Gillies
Journal:  PLoS One       Date:  2016-08-10       Impact factor: 3.240

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  1 in total

1.  Deep Convolutional Neural Network-Assisted Feature Extraction for Diagnostic Discrimination and Feature Visualization in Pancreatic Ductal Adenocarcinoma (PDAC) versus Autoimmune Pancreatitis (AIP).

Authors:  Sebastian Ziegelmayer; Georgios Kaissis; Felix Harder; Friederike Jungmann; Tamara Müller; Marcus Makowski; Rickmer Braren
Journal:  J Clin Med       Date:  2020-12-11       Impact factor: 4.241

  1 in total

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