| Literature DB >> 30443402 |
Vidya Zende1, Tejpalsingh Ramsingh Girase1, Nicolas Chrysochos2, Anant Ramakant Kapdi1, Carola Schulzke2.
Abstract
In the cation of the title mol-ecular salt,Entities:
Keywords: N-heterocyclic carbenes; amido-functionalization; crystal structure; electron-rich ligand; hydrogen bonding; imidazolium salt; sigma donor acetamide
Year: 2018 PMID: 30443402 PMCID: PMC6218894 DOI: 10.1107/S2056989018014792
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C9—H9⋯O1 | 0.95 | 2.35 | 2.915 (6) | 118 |
| N1—H1⋯Cl1 | 0.87 (5) | 2.32 (5) | 3.177 (4) | 167 (4) |
| C11—H11 | 0.99 | 2.75 | 3.541 (4) | 137 |
| C12—H12⋯Cl1i | 0.95 | 2.73 | 3.530 (4) | 143 |
| C15—H15 | 0.99 | 2.71 | 3.493 (5) | 136 |
| C11—H11 | 0.99 | 2.54 | 3.432 (5) | 150 |
| C13—H13⋯O1iii | 0.95 | 2.54 | 3.066 (5) | 115 |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 1Molecular structure of the title molecular salt, with the atom labelling and displacement ellipsoids drawn at the 50% probability level. In this and subsequent figures, only the major component of the disordered atom C1 is shown. The hydrogen bonds (Table 1 ▸) are shown as blue dashed lines.
Figure 2A view of the two-by-two hydrogen-bonded unit (dashed lines; see Table 1 ▸ for details). Only the H atoms (grey balls) involved in the intra- and intermolecular interactions have been included. The unlabelled atoms are related to the labelled atoms by the symmetry operation −x + , −y + , −z.
Figure 3Crystal packing of the title molecular salt, viewed along the b axis, showing the various hydrogen bonds as dashed lines (see Table 1 ▸ for details). Only the H atoms (grey balls) involved in these interactions have been included.
Experimental details
| Crystal data | |
| Chemical formula | C18H24N3O+·Cl− |
|
| 333.85 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 170 |
|
| 36.270 (7), 5.3986 (11), 18.620 (4) |
| β (°) | 103.34 (3) |
|
| 3547.6 (13) |
|
| 8 |
| Radiation type | Mo |
| μ (mm−1) | 0.22 |
| Crystal size (mm) | 0.35 × 0.27 × 0.13 |
| Data collection | |
| Diffractometer | Stoe IPDS2T |
| Absorption correction | Numerical ( |
|
| 0.561, 0.968 |
| No. of measured, independent and observed [ | 12392, 3134, 1953 |
|
| 0.119 |
| (sin θ/λ)max (Å−1) | 0.595 |
| Refinement | |
|
| 0.066, 0.199, 1.05 |
| No. of reflections | 3134 |
| No. of parameters | 224 |
| No. of restraints | 36 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.44, −0.40 |
Computer programs: X-AREA (Stoe & Cie, 2010 ▸), X-RED32 (Stoe & Cie, 2010 ▸), SHELXT2018 (Sheldrick, 2015a ▸), XP (Sheldrick, 2008 ▸), Mercury (Macrae et al., 2008 ▸), SHELXL2018 (Sheldrick, 2015b ▸), WinGX (Farrugia, 2012 ▸), PLATON (Spek, 2009 ▸) and publCIF (Westrip, 2010 ▸).
| C18H24N3O+·Cl− | |
| Monoclinic, | Mo |
| Cell parameters from 19866 reflections | |
| θ = 6.6–59.3° | |
| µ = 0.22 mm−1 | |
| β = 103.34 (3)° | |
| Prism, colourless | |
| 0.35 × 0.27 × 0.13 mm |
| Stoe IPDS2T diffractometer | 3134 independent reflections |
| Radiation source: fine-focus sealed tube | 1953 reflections with |
| Detector resolution: 6.67 pixels mm-1 | |
| ω scans | θmax = 25.0°, θmin = 3.5° |
| Absorption correction: numerical (X-Red32 and X-Shape; Stoe & Cie, 2010) | |
| 12392 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3134 reflections | (Δ/σ)max < 0.001 |
| 224 parameters | Δρmax = 0.44 e Å−3 |
| 36 restraints | Δρmin = −0.40 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refined as a 2-component twin. |
| Occ. (<1) | |||||
| N1 | 0.16282 (10) | 0.4778 (7) | 0.0721 (2) | 0.0366 (9) | |
| N2 | 0.25866 (10) | 0.7006 (6) | 0.13822 (19) | 0.0336 (8) | |
| N3 | 0.31102 (11) | 0.8875 (6) | 0.1857 (2) | 0.0358 (8) | |
| O1 | 0.18710 (10) | 0.7509 (6) | 0.16419 (18) | 0.0477 (8) | |
| C1 | 0.0069 (2) | 0.6310 (17) | 0.1297 (7) | 0.065 (3) | 0.84 (2) |
| H1A | −0.005777 | 0.746242 | 0.090345 | 0.078* | 0.84 (2) |
| H1B | −0.008010 | 0.623539 | 0.167931 | 0.078* | 0.84 (2) |
| C1' | 0.0140 (11) | 0.538 (7) | 0.163 (2) | 0.056 (9) | 0.16 (2) |
| H1'1 | 0.019558 | 0.439312 | 0.209509 | 0.067* | 0.16 (2) |
| H1'2 | −0.009825 | 0.630514 | 0.160560 | 0.067* | 0.16 (2) |
| C2 | 0.01033 (15) | 0.3703 (9) | 0.0973 (4) | 0.0588 (15) | |
| H2A | 0.007424 | 0.238929 | 0.132728 | 0.071* | |
| H2B | −0.008830 | 0.345562 | 0.050560 | 0.071* | |
| C3 | 0.05004 (14) | 0.3727 (9) | 0.0845 (3) | 0.0479 (12) | |
| C4 | 0.07030 (15) | 0.5732 (8) | 0.1194 (3) | 0.0464 (12) | |
| C5 | 0.04634 (15) | 0.7158 (10) | 0.1626 (4) | 0.0629 (16) | |
| H5A | 0.053825 | 0.675188 | 0.215787 | 0.075* | |
| H5B | 0.048800 | 0.896697 | 0.156268 | 0.075* | |
| C6 | 0.06731 (15) | 0.2103 (10) | 0.0450 (3) | 0.0539 (13) | |
| H6 | 0.053560 | 0.074806 | 0.019341 | 0.065* | |
| C7 | 0.10502 (14) | 0.2478 (8) | 0.0434 (3) | 0.0489 (12) | |
| H7 | 0.117384 | 0.133484 | 0.018010 | 0.059* | |
| C8 | 0.12457 (12) | 0.4493 (8) | 0.0782 (2) | 0.0361 (10) | |
| C9 | 0.10734 (13) | 0.6165 (8) | 0.1167 (3) | 0.0404 (10) | |
| H9 | 0.120702 | 0.756550 | 0.140374 | 0.048* | |
| C10 | 0.19013 (13) | 0.6220 (7) | 0.1116 (2) | 0.0351 (10) | |
| C11 | 0.22575 (12) | 0.6170 (8) | 0.0831 (2) | 0.0366 (10) | |
| H11A | 0.230239 | 0.446019 | 0.067916 | 0.044* | |
| H11B | 0.222334 | 0.724566 | 0.038996 | 0.044* | |
| C12 | 0.28154 (12) | 0.8823 (7) | 0.1286 (2) | 0.0337 (10) | |
| H12 | 0.277478 | 0.991130 | 0.087397 | 0.040* | |
| C13 | 0.30716 (14) | 0.7024 (8) | 0.2339 (3) | 0.0404 (11) | |
| H13 | 0.324273 | 0.664753 | 0.279459 | 0.048* | |
| C14 | 0.27447 (12) | 0.5842 (7) | 0.2044 (2) | 0.0346 (10) | |
| H14 | 0.264207 | 0.446855 | 0.225054 | 0.042* | |
| C15 | 0.34367 (14) | 1.0541 (8) | 0.1924 (3) | 0.0448 (11) | |
| H15A | 0.355727 | 1.079649 | 0.245245 | 0.054* | |
| H15B | 0.334866 | 1.217060 | 0.170671 | 0.054* | |
| C16 | 0.37271 (15) | 0.9480 (10) | 0.1533 (4) | 0.0598 (15) | |
| H16A | 0.359918 | 0.915740 | 0.101139 | 0.072* | |
| H16B | 0.392405 | 1.075129 | 0.153460 | 0.072* | |
| C17 | 0.39176 (17) | 0.7154 (11) | 0.1855 (4) | 0.0678 (17) | |
| H17A | 0.372720 | 0.581383 | 0.180888 | 0.081* | |
| H17B | 0.403047 | 0.741053 | 0.238706 | 0.081* | |
| C18 | 0.42267 (19) | 0.6376 (13) | 0.1468 (5) | 0.089 (2) | |
| H18A | 0.411994 | 0.626255 | 0.093572 | 0.133* | |
| H18B | 0.432805 | 0.475814 | 0.165602 | 0.133* | |
| H18C | 0.443086 | 0.760623 | 0.156499 | 0.133* | |
| H1 | 0.1675 (12) | 0.378 (8) | 0.039 (3) | 0.029 (11)* | |
| Cl1 | 0.19326 (3) | 0.10403 (18) | −0.03275 (7) | 0.0429 (3) |
| N1 | 0.036 (2) | 0.037 (2) | 0.038 (2) | 0.0015 (16) | 0.0122 (17) | −0.0060 (18) |
| N2 | 0.042 (2) | 0.0261 (17) | 0.035 (2) | 0.0016 (15) | 0.0149 (17) | −0.0008 (15) |
| N3 | 0.044 (2) | 0.0271 (17) | 0.040 (2) | −0.0053 (16) | 0.0163 (17) | −0.0018 (15) |
| O1 | 0.052 (2) | 0.0487 (18) | 0.047 (2) | −0.0017 (15) | 0.0207 (16) | −0.0168 (16) |
| C1 | 0.052 (4) | 0.058 (5) | 0.091 (7) | 0.015 (3) | 0.027 (4) | −0.003 (5) |
| C1' | 0.043 (15) | 0.046 (17) | 0.091 (19) | 0.016 (14) | 0.042 (14) | 0.001 (15) |
| C2 | 0.049 (3) | 0.054 (3) | 0.079 (4) | 0.001 (2) | 0.026 (3) | 0.003 (3) |
| C3 | 0.044 (3) | 0.046 (3) | 0.056 (3) | 0.002 (2) | 0.016 (2) | 0.003 (2) |
| C4 | 0.055 (3) | 0.041 (2) | 0.046 (3) | 0.009 (2) | 0.018 (2) | 0.002 (2) |
| C5 | 0.055 (3) | 0.053 (3) | 0.091 (4) | 0.010 (3) | 0.037 (3) | −0.002 (3) |
| C6 | 0.047 (3) | 0.048 (3) | 0.069 (4) | −0.004 (2) | 0.017 (3) | −0.009 (3) |
| C7 | 0.051 (3) | 0.040 (3) | 0.057 (3) | 0.000 (2) | 0.015 (3) | −0.010 (2) |
| C8 | 0.040 (2) | 0.036 (2) | 0.033 (2) | 0.0031 (18) | 0.0089 (19) | 0.0037 (18) |
| C9 | 0.044 (3) | 0.037 (2) | 0.042 (3) | 0.004 (2) | 0.014 (2) | −0.001 (2) |
| C10 | 0.044 (3) | 0.028 (2) | 0.036 (2) | 0.0026 (19) | 0.015 (2) | −0.0012 (19) |
| C11 | 0.042 (2) | 0.032 (2) | 0.036 (2) | −0.0015 (19) | 0.0079 (19) | −0.0058 (19) |
| C12 | 0.045 (3) | 0.0210 (19) | 0.037 (2) | −0.0004 (18) | 0.012 (2) | −0.0011 (17) |
| C13 | 0.054 (3) | 0.031 (2) | 0.040 (3) | 0.003 (2) | 0.018 (2) | 0.0033 (19) |
| C14 | 0.043 (2) | 0.031 (2) | 0.031 (2) | 0.0051 (19) | 0.0115 (19) | 0.0088 (18) |
| C15 | 0.050 (3) | 0.033 (2) | 0.053 (3) | −0.008 (2) | 0.014 (2) | −0.003 (2) |
| C16 | 0.052 (3) | 0.051 (3) | 0.079 (4) | −0.014 (2) | 0.019 (3) | −0.003 (3) |
| C17 | 0.060 (4) | 0.051 (3) | 0.097 (5) | −0.005 (3) | 0.027 (3) | −0.014 (3) |
| C18 | 0.071 (4) | 0.074 (4) | 0.136 (7) | −0.005 (3) | 0.055 (5) | −0.026 (4) |
| Cl1 | 0.0575 (7) | 0.0305 (5) | 0.0449 (7) | 0.0024 (5) | 0.0200 (5) | −0.0028 (5) |
| N1—C10 | 1.339 (6) | C2—C3 | 1.514 (7) |
| N1—C8 | 1.427 (6) | C3—C4 | 1.383 (7) |
| N2—C12 | 1.324 (5) | C3—C6 | 1.384 (7) |
| N2—C14 | 1.384 (5) | C4—C9 | 1.376 (7) |
| N2—C11 | 1.455 (6) | C4—C5 | 1.522 (7) |
| N3—C12 | 1.323 (6) | C6—C7 | 1.390 (7) |
| N3—C13 | 1.372 (5) | C7—C8 | 1.376 (6) |
| N3—C15 | 1.469 (6) | C8—C9 | 1.388 (6) |
| O1—C10 | 1.227 (5) | C10—C11 | 1.506 (6) |
| C1—C5 | 1.491 (8) | C13—C14 | 1.347 (7) |
| C1—C2 | 1.547 (8) | C15—C16 | 1.524 (7) |
| C1'—C2 | 1.508 (16) | C16—C17 | 1.491 (8) |
| C1'—C5 | 1.518 (16) | C17—C18 | 1.525 (8) |
| C10—N1—C8 | 129.0 (4) | C1'—C5—C4 | 102.8 (11) |
| C12—N2—C14 | 108.3 (4) | C3—C6—C7 | 119.2 (5) |
| C12—N2—C11 | 124.9 (4) | C8—C7—C6 | 120.5 (4) |
| C14—N2—C11 | 126.2 (3) | C7—C8—C9 | 120.9 (4) |
| C12—N3—C13 | 109.0 (4) | C7—C8—N1 | 116.9 (4) |
| C12—N3—C15 | 124.5 (4) | C9—C8—N1 | 122.2 (4) |
| C13—N3—C15 | 126.3 (4) | C4—C9—C8 | 117.9 (4) |
| C5—C1—C2 | 106.5 (5) | O1—C10—N1 | 125.3 (4) |
| C2—C1'—C5 | 107.1 (13) | O1—C10—C11 | 122.2 (4) |
| C1'—C2—C3 | 102.4 (11) | N1—C10—C11 | 112.5 (4) |
| C3—C2—C1 | 102.6 (5) | N2—C11—C10 | 112.1 (4) |
| C4—C3—C6 | 119.3 (5) | N3—C12—N2 | 108.8 (4) |
| C4—C3—C2 | 110.8 (4) | C14—C13—N3 | 106.9 (4) |
| C6—C3—C2 | 130.0 (5) | C13—C14—N2 | 107.1 (4) |
| C9—C4—C3 | 122.2 (4) | N3—C15—C16 | 111.2 (4) |
| C9—C4—C5 | 128.0 (5) | C17—C16—C15 | 115.5 (5) |
| C3—C4—C5 | 109.7 (4) | C16—C17—C18 | 111.4 (6) |
| C1—C5—C4 | 103.8 (5) |
| H··· | ||||
| C9—H9···O1 | 0.95 | 2.35 | 2.915 (6) | 118 |
| N1—H1···Cl1 | 0.87 (5) | 2.32 (5) | 3.177 (4) | 167 (4) |
| C11—H11 | 0.99 | 2.75 | 3.541 (4) | 137 |
| C12—H12···Cl1i | 0.95 | 2.73 | 3.530 (4) | 143 |
| C15—H15 | 0.99 | 2.71 | 3.493 (5) | 136 |
| C11—H11 | 0.99 | 2.54 | 3.432 (5) | 150 |
| C13—H13···O1iii | 0.95 | 2.54 | 3.066 (5) | 115 |