Literature DB >> 30443334

A thermodynamically consistent model of finite-state machines.

Dominique Chu1, Richard E Spinney2.   

Abstract

Finite-state machines (FSMs) are a theoretically and practically important model of computation. We propose a general, thermodynamically consistent model of FSMs and characterize the resource requirements of these machines. We model FSMs as time-inhomogeneous Markov chains. The computation is driven by instantaneous manipulations of the energy levels of the states. We calculate the entropy production of the machine, its error probability, and the time required to complete one update step. We find that a sequence of generalized bit-setting operations is sufficient to implement any FSM.

Keywords:  entropy; information processing; models of computation; stochastic thermodynamics

Year:  2018        PMID: 30443334      PMCID: PMC6227804          DOI: 10.1098/rsfs.2018.0037

Source DB:  PubMed          Journal:  Interface Focus        ISSN: 2042-8898            Impact factor:   3.906


  12 in total

1.  DNA molecule provides a computing machine with both data and fuel.

Authors:  Yaakov Benenson; Rivka Adar; Tamar Paz-Elizur; Zvi Livneh; Ehud Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-24       Impact factor: 11.205

2.  Thermodynamics of stochastic Turing machines.

Authors:  Philipp Strasberg; Javier Cerrillo; Gernot Schaller; Tobias Brandes
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-10-05

3.  Thermodynamic uncertainty relation for biomolecular processes.

Authors:  Andre C Barato; Udo Seifert
Journal:  Phys Rev Lett       Date:  2015-04-15       Impact factor: 9.161

4.  Optimal finite-time erasure of a classical bit.

Authors:  Patrick R Zulkowski; Michael R DeWeese
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2014-05-27

5.  Fundamental Costs in the Production and Destruction of Persistent Polymer Copies.

Authors:  Thomas E Ouldridge; Pieter Rein Ten Wolde
Journal:  Phys Rev Lett       Date:  2017-04-11       Impact factor: 9.161

6.  Finite-time erasing of information stored in fermionic bits.

Authors:  Giovanni Diana; G Baris Bagci; Massimiliano Esposito
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2013-01-11

7.  Framework for engineering finite state machines in gene regulatory networks.

Authors:  Kevin Oishi; Eric Klavins
Journal:  ACS Synth Biol       Date:  2014-03-05       Impact factor: 5.110

8.  Synthetic recombinase-based state machines in living cells.

Authors:  Nathaniel Roquet; Ava P Soleimany; Alyssa C Ferris; Scott Aaronson; Timothy K Lu
Journal:  Science       Date:  2016-07-21       Impact factor: 47.728

9.  Thermodynamics of quasideterministic digital computers.

Authors:  Dominique Chu
Journal:  Phys Rev E       Date:  2018-02       Impact factor: 2.529

10.  The energy-speed-accuracy tradeoff in sensory adaptation.

Authors:  Ganhui Lan; Pablo Sartori; Silke Neumann; Victor Sourjik; Yuhai Tu
Journal:  Nat Phys       Date:  2012-03-25       Impact factor: 20.034

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.