Literature DB >> 30442475

Critical period plasticity-related transcriptional aberrations in schizophrenia and bipolar disorder.

Milo R Smith1, Ben Readhead2, Joel T Dudley3, Hirofumi Morishita4.   

Abstract

Childhood critical periods of experience-dependent plasticity are essential for the development of environmentally appropriate behavior and cognition. Disruption of critical periods can alter development of normal function and confer risk for neurodevelopmental disorders. While genes and their expression relevant to neurodevelopment are associated with schizophrenia, the molecular relationship between schizophrenia and critical periods has not been assessed systematically. Here, we apply a transcriptome-based bioinformatics approach to assess whether genes associated with the human critical period for visual cortex plasticity, a well-studied model of cortical critical periods, are aberrantly expressed in schizophrenia and bipolar disorder. Across two dozen datasets encompassing 522 cases and 374 controls, we find that the majority show aberrations in expression of genes associated with the critical period. We observed both hyper- and hypo-critical period plasticity phenotypes at the transcriptome level, which partially mapped to drug candidates that reverse the disorder signatures in silico. Our findings indicate plasticity aberrations in schizophrenia and their treatment may need to be considered in the context of subpopulations with elevated and others reduced plasticity. Future work should leverage ongoing consortia RNA-sequencing efforts to tease out the sources of plasticity-related transcriptional aberrations seen in schizophrenia, including true biological heterogeneity, interaction between normal development/aging and the disorder, and medication history. Our study also urges innovation towards direct assessment of visual cortex plasticity in humans with schizophrenia to precisely deconstruct the role of plasticity in this disorder.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Bioinformatics; Critical period; Drug repurposing; Neuroplasticity; Schizophrenia; Transcriptome

Mesh:

Year:  2018        PMID: 30442475      PMCID: PMC6591017          DOI: 10.1016/j.schres.2018.10.021

Source DB:  PubMed          Journal:  Schizophr Res        ISSN: 0920-9964            Impact factor:   4.939


  62 in total

Review 1.  Critical period regulation.

Authors:  Takao K Hensch
Journal:  Annu Rev Neurosci       Date:  2004       Impact factor: 12.449

Review 2.  Balancing plasticity/stability across brain development.

Authors:  Anne E Takesian; Takao K Hensch
Journal:  Prog Brain Res       Date:  2013       Impact factor: 2.453

3.  Integrative Analysis of Disease Signatures Shows Inflammation Disrupts Juvenile Experience-Dependent Cortical Plasticity.

Authors:  Milo R Smith; Poromendro Burman; Masato Sadahiro; Brian A Kidd; Joel T Dudley; Hirofumi Morishita
Journal:  eNeuro       Date:  2017-01-18

4.  Mistakes I Have Made in My Research Career.

Authors:  Robin M Murray
Journal:  Schizophr Bull       Date:  2017-03-01       Impact factor: 9.306

5.  Dysfunctional long-term potentiation-like plasticity in schizophrenia revealed by transcranial direct current stimulation.

Authors:  Alkomiet Hasan; Michael A Nitsche; Bettina Rein; Thomas Schneider-Axmann; Birgit Guse; Oliver Gruber; Peter Falkai; Thomas Wobrock
Journal:  Behav Brain Res       Date:  2011-05-30       Impact factor: 3.332

6.  Gene expression elucidates functional impact of polygenic risk for schizophrenia.

Authors:  Menachem Fromer; Panos Roussos; Solveig K Sieberts; Jessica S Johnson; David H Kavanagh; Thanneer M Perumal; Douglas M Ruderfer; Edwin C Oh; Aaron Topol; Hardik R Shah; Lambertus L Klei; Robin Kramer; Dalila Pinto; Zeynep H Gümüş; A Ercument Cicek; Kristen K Dang; Andrew Browne; Cong Lu; Lu Xie; Ben Readhead; Eli A Stahl; Jianqiu Xiao; Mahsa Parvizi; Tymor Hamamsy; John F Fullard; Ying-Chih Wang; Milind C Mahajan; Jonathan M J Derry; Joel T Dudley; Scott E Hemby; Benjamin A Logsdon; Konrad Talbot; Towfique Raj; David A Bennett; Philip L De Jager; Jun Zhu; Bin Zhang; Patrick F Sullivan; Andrew Chess; Shaun M Purcell; Leslie A Shinobu; Lara M Mangravite; Hiroyoshi Toyoshiba; Raquel E Gur; Chang-Gyu Hahn; David A Lewis; Vahram Haroutunian; Mette A Peters; Barbara K Lipska; Joseph D Buxbaum; Eric E Schadt; Keisuke Hirai; Kathryn Roeder; Kristen J Brennand; Nicholas Katsanis; Enrico Domenici; Bernie Devlin; Pamela Sklar
Journal:  Nat Neurosci       Date:  2016-09-26       Impact factor: 24.884

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Authors:  Joel T Dudley; Robert Tibshirani; Tarangini Deshpande; Atul J Butte
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Review 8.  Critical period revisited: impact on vision.

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Journal:  Curr Opin Neurobiol       Date:  2008-06-03       Impact factor: 6.627

9.  Precision annotation of digital samples in NCBI's gene expression omnibus.

Authors:  Dexter Hadley; James Pan; Osama El-Sayed; Jihad Aljabban; Imad Aljabban; Tej D Azad; Mohamad O Hadied; Shuaib Raza; Benjamin Abhishek Rayikanti; Bin Chen; Hyojung Paik; Dvir Aran; Jordan Spatz; Daniel Himmelstein; Maryam Panahiazar; Sanchita Bhattacharya; Marina Sirota; Mark A Musen; Atul J Butte
Journal:  Sci Data       Date:  2017-09-19       Impact factor: 6.444

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Authors:  Edward Y Chen; Christopher M Tan; Yan Kou; Qiaonan Duan; Zichen Wang; Gabriela Vaz Meirelles; Neil R Clark; Avi Ma'ayan
Journal:  BMC Bioinformatics       Date:  2013-04-15       Impact factor: 3.169

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  5 in total

Review 1.  Stress during critical periods of development and risk for schizophrenia.

Authors:  Felipe V Gomes; Xiyu Zhu; Anthony A Grace
Journal:  Schizophr Res       Date:  2019-01-30       Impact factor: 4.939

Review 2.  Psychosis spectrum illnesses as disorders of prefrontal critical period plasticity.

Authors:  Sophia Vinogradov; Matthew V Chafee; Erik Lee; Hirofumi Morishita
Journal:  Neuropsychopharmacology       Date:  2022-09-30       Impact factor: 8.294

3.  A Practical Guide to Sparse k-Means Clustering for Studying Molecular Development of the Human Brain.

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Journal:  Front Neurosci       Date:  2021-11-16       Impact factor: 5.152

4.  Clozapine Reverses Dysfunction of Glutamatergic Neurons Derived From Clozapine-Responsive Schizophrenia Patients.

Authors:  Hana Hribkova; Ondrej Svoboda; Elis Bartecku; Jana Zelinkova; Jana Horinkova; Lubica Lacinova; Martin Piskacek; Bretislav Lipovy; Ivo Provaznik; Joel C Glover; Tomas Kasparek; Yuh-Man Sun
Journal:  Front Cell Neurosci       Date:  2022-02-23       Impact factor: 5.505

5.  A Primer on Constructing Plasticity Phenotypes to Classify Experience-Dependent Development of the Visual Cortex.

Authors:  Justin L Balsor; Dezi Ahuja; David G Jones; Kathryn M Murphy
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  5 in total

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