Literature DB >> 3043212

[Algorithms for constructing phylogenetic trees of maximum topological similarity].

S V Iushmanov, K M Chumakov.   

Abstract

The paper concerns the practical realization of the maximum topologic similarity principle for phylogenetic reconstruction. This novel principle is described in the accompanying paper. Two algorithms that were embodied in the computer program allow one to find out the unique tree in case when source data admit the existence of such tree. In case if numerous parallel mutations make such precise realization impossible, algorithms allow one to obtain approximations to the maximum topologic similarity trees with a high computation efficiency. Examples illustrating use of these algorithms, as well as discussion of biological consistency of the novel concept are presented.

Mesh:

Year:  1988        PMID: 3043212

Source DB:  PubMed          Journal:  Mol Gen Mikrobiol Virusol        ISSN: 0208-0613


  6 in total

1.  Nucleotide sequence of the bla(RTG-2) (CARB-5) gene and phylogeny of a new group of carbenicillinases.

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Journal:  Antimicrob Agents Chemother       Date:  2000-04       Impact factor: 5.191

2.  Genotyping of measles virus in clinical specimens on the basis of oligonucleotide microarray hybridization patterns.

Authors:  Alexander A Neverov; Michaela A Riddell; William J Moss; Dmitriy V Volokhov; Paul A Rota; Luis E Lowe; Doris Chibo; Sheilagh B Smit; Diane E Griffin; Konstantin M Chumakov; Vladimir E Chizhikov
Journal:  J Clin Microbiol       Date:  2006-10       Impact factor: 5.948

3.  Dictyostelium possesses highly diverged presenilin/gamma-secretase that regulates growth and cell-fate specification and can accurately process human APP: a system for functional studies of the presenilin/gamma-secretase complex.

Authors:  Vanessa C McMains; Michael Myre; Lisa Kreppel; Alan R Kimmel
Journal:  Dis Model Mech       Date:  2010-08-10       Impact factor: 5.758

4.  Novel thigmomorphogenetic responses in Carica papaya: touch decreases anthocyanin levels and stimulates petiole cork outgrowths.

Authors:  Brad W Porter; Yun J Zhu; David T Webb; David A Christopher
Journal:  Ann Bot       Date:  2009-01-31       Impact factor: 4.357

5.  Probable reassortment of genomic elements among elongated RNA-containing plant viruses.

Authors:  V V Dolja; J G Atabekov
Journal:  J Mol Evol       Date:  1989-07       Impact factor: 2.395

6.  Alleviating Cr(VI) stress in horse gram (Macrotyloma uniflorum Var. Madhu) by native Cr-tolerant nodule endophytes isolated from contaminated site of Sukinda.

Authors:  Shilpee Dhali; Madhusmita Pradhan; Ranjan Kumar Sahoo; Santanu Mohanty; Chinmay Pradhan
Journal:  Environ Sci Pollut Res Int       Date:  2021-02-20       Impact factor: 5.190

  6 in total

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