Literature DB >> 30425105

Peripheral Blood TCR Repertoire Profiling May Facilitate Patient Stratification for Immunotherapy against Melanoma.

Sabrina A Hogan1, Anaïs Courtier2, Phil F Cheng1, Nicoletta F Jaberg-Bentele1, Simone M Goldinger1, Manuarii Manuel2, Solène Perez2, Nadia Plantier2, Jean-François Mouret2, Thi Dan Linh Nguyen-Kim1, Marieke I G Raaijmakers1, Pia Kvistborg3, Nicolas Pasqual2, John B A G Haanen3, Reinhard Dummer1, Mitchell P Levesque4.   

Abstract

Many metastatic melanoma patients experience durable responses to anti-PD1 and/or anti-CTLA4; however, a significant proportion (over 50%) do not benefit from the therapies. In this study, we sought to assess pretreatment liquid biopsies for biomarkers that may correlate with response to checkpoint blockade. We measured the combinatorial diversity evenness of the T-cell receptor (TCR) repertoire (the DE50, with low values corresponding to more clonality and lack of TCR diversity) in pretreatment peripheral blood mononuclear cells from melanoma patients treated with anti-CTLA4 (n = 42) or anti-PD1 (n = 38) using a multi-N-plex PCR assay on genomic DNA (gDNA). A receiver operating characteristic curve determined the optimal threshold for a dichotomized analysis according to objective responses as defined by RECIST1.1. Correlations between treatment outcome, clinical variables, and DE50 were assessed in multivariate regression models and confirmed with Fisher exact tests. In samples obtained prior to treatment initiation, we showed that low DE50 values were predictive of a longer progression-free survival and good responses to PD-1 blockade, but, on the other hand, predicted a poor response to CTLA4 inhibition. Multivariate logistic regression models identified DE50 as the only independent predictive factor for response to anti-CTLA4 therapy (P = 0.03) and anti-PD1 therapy (P = 0.001). Fisher exact tests confirmed the association of low DE50 with response in the anti-CTLA4 (P = 0.041) and the anti-PD1 cohort (P = 0.0016). Thus, the evaluation of basal TCR repertoire diversity in peripheral blood, using a PCR-based method, could help predict responses to anti-PD1 and anti-CTLA4 therapies. ©2018 American Association for Cancer Research.

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Year:  2018        PMID: 30425105     DOI: 10.1158/2326-6066.CIR-18-0136

Source DB:  PubMed          Journal:  Cancer Immunol Res        ISSN: 2326-6066            Impact factor:   11.151


  48 in total

1.  Benchmarking of T cell receptor repertoire profiling methods reveals large systematic biases.

Authors:  Pierre Barennes; Valentin Quiniou; Mikhail Shugay; Evgeniy S Egorov; Alexey N Davydov; Dmitriy M Chudakov; Imran Uddin; Mazlina Ismail; Theres Oakes; Benny Chain; Anne Eugster; Karl Kashofer; Peter P Rainer; Samuel Darko; Amy Ransier; Daniel C Douek; David Klatzmann; Encarnita Mariotti-Ferrandiz
Journal:  Nat Biotechnol       Date:  2020-09-07       Impact factor: 54.908

2.  Immunotherapy for skin cancer.

Authors:  Kelly G Paulson; Miranda C Lahman; Aude G Chapuis; Isaac Brownell
Journal:  Int Immunol       Date:  2019-07-13       Impact factor: 4.823

3.  Peripheral blood T-cell receptor repertoire as a predictor of clinical outcomes in gastrointestinal cancer patients treated with PD-1 inhibitor.

Authors:  S Ji; J Li; L Chang; C Zhao; R Jia; Z Tan; R Liu; Y Zhang; Y Li; G Yin; Y Guan; X Xia; X Yi; J Xu
Journal:  Clin Transl Oncol       Date:  2021-02-13       Impact factor: 3.405

4.  Genomic and TCR profiling data reveal the distinct molecular traits in epithelial ovarian cancer histotypes.

Authors:  Shan Zhu; Chunliu Zhang; Dongyan Cao; Jing Bai; Shuangni Yu; Jie Chen; Jing Wang; Tong Ren; Jiaxin Yang; Mei Yu; Xiao Xiao; Yuhua Gong; Yanfang Guan; Peiling Li; Ying Yue; Rutie Yin; Yongjun Wang; Ruifang An; Ge Lou; Jianlin Yuan; Guonan Zhang; Xuefeng Xia; Ling Yang; Yang Xiang
Journal:  Oncogene       Date:  2022-04-25       Impact factor: 9.867

5.  Recurrent somatic mutations as predictors of immunotherapy response.

Authors:  Zoran Z Gajic; Aditya Deshpande; Mateusz Legut; Marcin Imieliński; Neville E Sanjana
Journal:  Nat Commun       Date:  2022-07-08       Impact factor: 17.694

6.  T Cell Receptor Diversity and Lineage Relationship between Virus-Specific CD8 T Cell Subsets during Chronic Lymphocytic Choriomeningitis Virus Infection.

Authors:  Yun Min Chang; Andreas Wieland; Zheng-Rong Li; Se Jin Im; Donald J McGuire; Haydn T Kissick; Rustom Antia; Rafi Ahmed
Journal:  J Virol       Date:  2020-09-29       Impact factor: 5.103

Review 7.  Immune profiling of pediatric solid tumors.

Authors:  Rachael L Terry; Deborah Meyran; David S Ziegler; Michelle Haber; Paul G Ekert; Joseph A Trapani; Paul J Neeson
Journal:  J Clin Invest       Date:  2020-07-01       Impact factor: 14.808

8.  Spatial heterogeneity of the T cell receptor repertoire reflects the mutational landscape in lung cancer.

Authors:  Kroopa Joshi; Marc Robert de Massy; Mazlina Ismail; James L Reading; Imran Uddin; Annemarie Woolston; Emine Hatipoglu; Theres Oakes; Rachel Rosenthal; Thomas Peacock; Tahel Ronel; Mahdad Noursadeghi; Virginia Turati; Andrew J S Furness; Andrew Georgiou; Yien Ning Sophia Wong; Assma Ben Aissa; Mariana Werner Sunderland; Mariam Jamal-Hanjani; Selvaraju Veeriah; Nicolai J Birkbak; Gareth A Wilson; Crispin T Hiley; Ehsan Ghorani; José Afonso Guerra-Assunção; Javier Herrero; Tariq Enver; Sine R Hadrup; Allan Hackshaw; Karl S Peggs; Nicholas McGranahan; Charles Swanton; Sergio A Quezada; Benny Chain
Journal:  Nat Med       Date:  2019-10-07       Impact factor: 53.440

9.  A peripheral immune signature of responsiveness to PD-1 blockade in patients with classical Hodgkin lymphoma.

Authors:  Fathima Zumla Cader; Xihao Hu; Walter L Goh; Kirsty Wienand; Jing Ouyang; Elisa Mandato; Robert Redd; Lee N Lawton; Pei-Hsuan Chen; Jason L Weirather; Ron C J Schackmann; Bo Li; Wenjiang Ma; Philippe Armand; Scott J Rodig; Donna Neuberg; X Shirley Liu; Margaret A Shipp
Journal:  Nat Med       Date:  2020-08-10       Impact factor: 53.440

Review 10.  The Challenges of Tumor Mutational Burden as an Immunotherapy Biomarker.

Authors:  Denis L Jardim; Aaron Goodman; Debora de Melo Gagliato; Razelle Kurzrock
Journal:  Cancer Cell       Date:  2020-10-29       Impact factor: 31.743

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