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Literature DB >> 30421446

Robust remapping of equine SNP array coordinates to EquCab3.

Samantha K Beeson¹, Robert J Schaefer¹, Victor C Mason², Molly E McCue¹.

Abstract

Entities: Gene Species

Mesh：

Year: 2018 PMID： 30421446 PMCID： PMC6349531 DOI： 10.1111/age.12745

Source DB: PubMed Journal: Anim Genet ISSN： 0268-9146 Impact factor: 3.169

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Cited

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10 in total

1. Runs of homozygosity in Sable Island feral horses reveal the genomic consequences of inbreeding and divergence from domestic breeds.

Authors: Julie Colpitts; Philip Dunstan McLoughlin; Jocelyn Poissant
Journal: BMC Genomics Date: 2022-07-12 Impact factor: 4.547

2. Equine recombination map updated to EquCab3.0.

Authors: S K Beeson; J R Mickelson; M E McCue
Journal: Anim Genet Date: 2019-12-30 Impact factor: 3.169

3. Genome-Wide Association Study and Subsequent Exclusion of ATCAY as a Candidate Gene Involved in Equine Neuroaxonal Dystrophy Using Two Animal Models.

Authors: Erin N Hales; Christina Esparza; Sichong Peng; Anna R Dahlgren; Janel M Peterson; Andrew D Miller; Carrie J Finno
Journal: Genes (Basel) Date: 2020-01-10 Impact factor: 4.096

4. Genome-Wide Association Analyses of Equine Metabolic Syndrome Phenotypes in Welsh Ponies and Morgan Horses.

Authors: Elaine Norton; Nichol Schultz; Ray Geor; Dianne McFarlane; James Mickelson; Molly McCue
Journal: Genes (Basel) Date: 2019-11-06 Impact factor: 4.096

5. Frameshift Variant in MFSD12 Explains the Mushroom Coat Color Dilution in Shetland Ponies.

Authors: Jocelyn Tanaka; Tosso Leeb; James Rushton; Thomas R Famula; Maura Mack; Vidhya Jagannathan; Christine Flury; Iris Bachmann; John Eberth; Sue M McDonnell; Maria Cecilia T Penedo; Rebecca R Bellone
Journal: Genes (Basel) Date: 2019-10-19 Impact factor: 4.096

Review 6. Ten years of the horse reference genome: insights into equine biology, domestication and population dynamics in the post-genome era.

Authors: T Raudsepp; C J Finno; R R Bellone; J L Petersen
Journal: Anim Genet Date: 2019-09-30 Impact factor: 3.169

Robust remapping of equine SNP array coordinates to EquCab3.

1. Runs of homozygosity in Sable Island feral horses reveal the genomic consequences of inbreeding and divergence from domestic breeds.

2. Equine recombination map updated to EquCab3.0.

3. Genome-Wide Association Study and Subsequent Exclusion of ATCAY as a Candidate Gene Involved in Equine Neuroaxonal Dystrophy Using Two Animal Models.

4. Genome-Wide Association Analyses of Equine Metabolic Syndrome Phenotypes in Welsh Ponies and Morgan Horses.

5. Frameshift Variant in MFSD12 Explains the Mushroom Coat Color Dilution in Shetland Ponies.

Review 6. Ten years of the horse reference genome: insights into equine biology, domestication and population dynamics in the post-genome era.

7. Whole genome sequencing identified a 16 kilobase deletion on ECA13 associated with distichiasis in Friesian horses.

8. Fine-Scale Analysis of Runs of Homozygosity Islands Affecting Fertility in Mares.

9. Genome-wide survey on three local horse populations with a focus on runs of homozygosity pattern.

10. Genomic Divergence in Swedish Warmblood Horses Selected for Equestrian Disciplines.