Literature DB >> 30420685

Fast, in vivo voltage imaging using a red fluorescent indicator.

Madhuvanthi Kannan1,2,3, Ganesh Vasan1,2,3, Cheng Huang4, Simon Haziza4, Jin Zhong Li4,5, Hakan Inan4, Mark J Schnitzer4,5,6, Vincent A Pieribone7,8,9.   

Abstract

Genetically encoded voltage indicators (GEVIs) are emerging optical tools for acquiring brain-wide cell-type-specific functional data at unparalleled temporal resolution. To broaden the application of GEVIs in high-speed multispectral imaging, we used a high-throughput strategy to develop voltage-activated red neuronal activity monitor (VARNAM), a fusion of the fast Acetabularia opsin and the bright red fluorophore mRuby3. Imageable under the modest illumination intensities required by bright green probes (<50 mW mm-2), VARNAM is readily usable in vivo. VARNAM can be combined with blue-shifted optical tools to enable cell-type-specific all-optical electrophysiology and dual-color spike imaging in acute brain slices and live Drosophila. With enhanced sensitivity to subthreshold voltages, VARNAM resolves postsynaptic potentials in slices and cortical and hippocampal rhythms in freely behaving mice. Together, VARNAM lends a new hue to the optical toolbox, opening the door to high-speed in vivo multispectral functional imaging.

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Year:  2018        PMID: 30420685      PMCID: PMC6516062          DOI: 10.1038/s41592-018-0188-7

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  51 in total

1.  Crystal structure of the eukaryotic light-driven proton-pumping rhodopsin, Acetabularia rhodopsin II, from marine alga.

Authors:  Takashi Wada; Kazumi Shimono; Takashi Kikukawa; Masakatsu Hato; Naoko Shinya; So Young Kim; Tomomi Kimura-Someya; Mikako Shirouzu; Jun Tamogami; Seiji Miyauchi; Kwang-Hwan Jung; Naoki Kamo; Shigeyuki Yokoyama
Journal:  J Mol Biol       Date:  2011-06-25       Impact factor: 5.469

2.  Accuracy and precision in quantitative fluorescence microscopy.

Authors:  Jennifer C Waters
Journal:  J Cell Biol       Date:  2009-06-29       Impact factor: 10.539

3.  Multiple modes of network homeostasis in visual cortical layer 2/3.

Authors:  Arianna Maffei; Gina G Turrigiano
Journal:  J Neurosci       Date:  2008-04-23       Impact factor: 6.167

4.  Subcellular Imaging of Voltage and Calcium Signals Reveals Neural Processing In Vivo.

Authors:  Helen H Yang; François St-Pierre; Xulu Sun; Xiaozhe Ding; Michael Z Lin; Thomas R Clandinin
Journal:  Cell       Date:  2016-06-02       Impact factor: 41.582

5.  Visual Deprivation During the Critical Period Enhances Layer 2/3 GABAergic Inhibition in Mouse V1.

Authors:  Madhuvanthi Kannan; Garrett G Gross; Don B Arnold; Michael J Higley
Journal:  J Neurosci       Date:  2016-06-01       Impact factor: 6.167

6.  Firing rate homeostasis in visual cortex of freely behaving rodents.

Authors:  Keith B Hengen; Mary E Lambo; Stephen D Van Hooser; Donald B Katz; Gina G Turrigiano
Journal:  Neuron       Date:  2013-10-16       Impact factor: 17.173

7.  Monitoring brain activity with protein voltage and calcium sensors.

Authors:  Douglas A Storace; Oliver R Braubach; Lei Jin; Lawrence B Cohen; Uhna Sung
Journal:  Sci Rep       Date:  2015-05-13       Impact factor: 4.379

8.  Sensitive red protein calcium indicators for imaging neural activity.

Authors:  Hod Dana; Boaz Mohar; Yi Sun; Sujatha Narayan; Andrew Gordus; Jeremy P Hasseman; Getahun Tsegaye; Graham T Holt; Amy Hu; Deepika Walpita; Ronak Patel; John J Macklin; Cornelia I Bargmann; Misha B Ahrens; Eric R Schreiter; Vivek Jayaraman; Loren L Looger; Karel Svoboda; Douglas S Kim
Journal:  Elife       Date:  2016-03-24       Impact factor: 8.140

9.  Ultrasensitive fluorescent proteins for imaging neuronal activity.

Authors:  Tsai-Wen Chen; Trevor J Wardill; Yi Sun; Stefan R Pulver; Sabine L Renninger; Amy Baohan; Eric R Schreiter; Rex A Kerr; Michael B Orger; Vivek Jayaraman; Loren L Looger; Karel Svoboda; Douglas S Kim
Journal:  Nature       Date:  2013-07-18       Impact factor: 49.962

10.  Long-term dynamics of CA1 hippocampal place codes.

Authors:  Yaniv Ziv; Laurie D Burns; Eric D Cocker; Elizabeth O Hamel; Kunal K Ghosh; Lacey J Kitch; Abbas El Gamal; Mark J Schnitzer
Journal:  Nat Neurosci       Date:  2013-02-10       Impact factor: 24.884

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  39 in total

1.  Genetically Encoded Voltage Indicators.

Authors:  Irene Mollinedo-Gajate; Chenchen Song; Thomas Knöpfel
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  A far-red hybrid voltage indicator enabled by bioorthogonal engineering of rhodopsin on live neurons.

Authors:  Shuzhang Liu; Chang Lin; Yongxian Xu; Huixin Luo; Luxin Peng; Xiangmei Zeng; Huangtao Zheng; Peng R Chen; Peng Zou
Journal:  Nat Chem       Date:  2021-04-15       Impact factor: 24.427

Review 3.  Genetically Encodable Fluorescent and Bioluminescent Biosensors Light Up Signaling Networks.

Authors:  Xin Zhou; Sohum Mehta; Jin Zhang
Journal:  Trends Biochem Sci       Date:  2020-07-10       Impact factor: 13.807

Review 4.  Wide. Fast. Deep: Recent Advances in Multiphoton Microscopy of In Vivo Neuronal Activity.

Authors:  Jérôme Lecoq; Natalia Orlova; Benjamin F Grewe
Journal:  J Neurosci       Date:  2019-10-02       Impact factor: 6.167

Review 5.  Fluorescence imaging of large-scale neural ensemble dynamics.

Authors:  Tony Hyun Kim; Mark J Schnitzer
Journal:  Cell       Date:  2022-01-06       Impact factor: 41.582

Review 6.  Optical voltage imaging in neurons: moving from technology development to practical tool.

Authors:  Thomas Knöpfel; Chenchen Song
Journal:  Nat Rev Neurosci       Date:  2019-11-08       Impact factor: 34.870

7.  Voltage Imaging with a NIR-Absorbing Phosphine Oxide Rhodamine Voltage Reporter.

Authors:  Monica A Gonzalez; Alison S Walker; Kevin J Cao; Julia R Lazzari-Dean; Nicholas S Settineri; Eui Ju Kong; Richard H Kramer; Evan W Miller
Journal:  J Am Chem Soc       Date:  2021-01-27       Impact factor: 15.419

8.  Identification and quantification of neuronal ensembles in optical imaging experiments.

Authors:  Michael Wenzel; Jordan P Hamm
Journal:  J Neurosci Methods       Date:  2020-12-24       Impact factor: 2.390

9.  Microbial Rhodopsin Optogenetic Tools: Application for Analyses of Synaptic Transmission and of Neuronal Network Activity in Behavior.

Authors:  Amelie Bergs; Thilo Henss; Caspar Glock; Jatin Nagpal; Alexander Gottschalk
Journal:  Methods Mol Biol       Date:  2022

10.  Methods for analyzing neuronal structure and activity in Caenorhabditis elegans.

Authors:  Scott W Emmons; Eviatar Yemini; Manuel Zimmer
Journal:  Genetics       Date:  2021-08-09       Impact factor: 4.562

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