Literature DB >> 30420511

A long-term survey unveils strong seasonal patterns in the airborne microbiome coupled to general and regional atmospheric circulations.

Joan Cáliz1, Xavier Triadó-Margarit1, Lluís Camarero1, Emilio O Casamayor2.   

Abstract

Airborne microbes (bacteria, archaea, protists, and fungi) were surveyed over a 7-y period via high-throughput massive sequencing of 16S and 18S rRNA genes in rain and snow samples collected fortnightly at a high-elevation mountain Long-Term Ecological Research (LTER) Network site (LTER-Aigüestortes, Central Pyrenees, Spain). This survey constitutes the most comprehensive mountain-top aerobiology study reported to date. The air mass origins were tracked through modeled back-trajectories and analysis of rain water chemical composition. Consistent microbial seasonal patterns were observed with highly divergent summer and winter communities recurrent in time. Indicative microbial taxa were unveiled as a forensic signature, and ubiquitous taxa were observed as common atmosphere inhabitants, highlighting aerosols as a potentially successful mechanism for global microbial dispersal. Source-tracking analyses identified freshwater, cropland, and urban biomes as the most important sources for airborne bacteria in summer, while marine and forest biomes prevailed in winter, in agreement with air mass retrotrajectories and the prevailing general and regional atmospheric circulation.

Entities:  

Keywords:  LTER; aeroplankton; bioaerosols; intercontinental dispersal; microbial forensics

Mesh:

Substances:

Year:  2018        PMID: 30420511      PMCID: PMC6275539          DOI: 10.1073/pnas.1812826115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-28       Impact factor: 11.205

8.  Microbial mass movements.

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Journal:  Front Microbiol       Date:  2018-08-14       Impact factor: 5.640

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  33 in total

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Journal:  Appl Environ Microbiol       Date:  2020-12-17       Impact factor: 4.792

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-10-05       Impact factor: 6.237

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Review 6.  Biowarfare, bioterrorism and biocrime: A historical overview on microbial harmful applications.

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7.  Urban Aerobiomes are Influenced by Season, Vegetation, and Individual Site Characteristics.

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8.  Inferring long-distance connectivity shaped by air-mass movement for improved experimental design in aerobiology.

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9.  Airborne bacteria confirm the pristine nature of the Southern Ocean boundary layer.

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Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-01       Impact factor: 11.205

10.  A global metagenomic map of urban microbiomes and antimicrobial resistance.

Authors:  David Danko; Daniela Bezdan; Evan E Afshin; Sofia Ahsanuddin; Chandrima Bhattacharya; Daniel J Butler; Kern Rei Chng; Daisy Donnellan; Jochen Hecht; Katelyn Jackson; Katerina Kuchin; Mikhail Karasikov; Abigail Lyons; Lauren Mak; Dmitry Meleshko; Harun Mustafa; Beth Mutai; Russell Y Neches; Amanda Ng; Olga Nikolayeva; Tatyana Nikolayeva; Eileen Png; Krista A Ryon; Jorge L Sanchez; Heba Shaaban; Maria A Sierra; Dominique Thomas; Ben Young; Omar O Abudayyeh; Josue Alicea; Malay Bhattacharyya; Ran Blekhman; Eduardo Castro-Nallar; Ana M Cañas; Aspassia D Chatziefthimiou; Robert W Crawford; Francesca De Filippis; Youping Deng; Christelle Desnues; Emmanuel Dias-Neto; Marius Dybwad; Eran Elhaik; Danilo Ercolini; Alina Frolova; Dennis Gankin; Jonathan S Gootenberg; Alexandra B Graf; David C Green; Iman Hajirasouliha; Jaden J A Hastings; Mark Hernandez; Gregorio Iraola; Soojin Jang; Andre Kahles; Frank J Kelly; Kaymisha Knights; Nikos C Kyrpides; Paweł P Łabaj; Patrick K H Lee; Marcus H Y Leung; Per O Ljungdahl; Gabriella Mason-Buck; Ken McGrath; Cem Meydan; Emmanuel F Mongodin; Milton Ozorio Moraes; Niranjan Nagarajan; Marina Nieto-Caballero; Houtan Noushmehr; Manuela Oliveira; Stephan Ossowski; Olayinka O Osuolale; Orhan Özcan; David Paez-Espino; Nicolás Rascovan; Hugues Richard; Gunnar Rätsch; Lynn M Schriml; Torsten Semmler; Osman U Sezerman; Leming Shi; Tieliu Shi; Rania Siam; Le Huu Song; Haruo Suzuki; Denise Syndercombe Court; Scott W Tighe; Xinzhao Tong; Klas I Udekwu; Juan A Ugalde; Brandon Valentine; Dimitar I Vassilev; Elena M Vayndorf; Thirumalaisamy P Velavan; Jun Wu; María M Zambrano; Jifeng Zhu; Sibo Zhu; Christopher E Mason
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