Literature DB >> 30417366

Four long noncoding RNAs as potential prognostic biomarkers for hepatocellular carcinoma.

Jianchu Wang1,2, Jian Pu1,2, Tianwei Yao1,2, Xiaojie Lu2, Yibin Deng2,3,4.   

Abstract

The study aimed to identify the long noncoding RNAs (lncRNAs) biomarkers for occurrence and prognosis of patients with hepatocellular carcinoma (HCC), and simultaneously to investigate the potential role of lncRNAs in the oncogenesis of HCC. The lncRNAs expression data and the corresponding clinical information of HCC samples were extracted from The Cancer Genome Atlas (TCGA) database. The differentially expressed genes and lncRNAs were identified and the correlation networks were constructed. In this study, we identified 212 differentially expressed lncRNAs and 7,577 differentially expressed genes between liver HCC tumor tissues and normal tissue samples. And then, combining with clinical information, a total of 11 lncRNAs and 162 genes as HCC biomarkers were identified by comprehensive bioinformatics analysis. Further, through coexpress network analysis, we confirmed four lncRNAs (lncRNA_ANKRD10.IT1, lncRNA_CTD.2583A14.8, lncRNA_RP11.404P21.3, and lncRNA_RP11.488L18.10), which can serve as prognostic biomarkers for HCC. The four lncRNAs identified in this study may serve as a potential therapy target for HCC.
© 2018 Wiley Periodicals, Inc.

Entities:  

Keywords:  TCGA; differential expression; hepatocellular carcinoma; long noncoding RNAs

Mesh:

Substances:

Year:  2018        PMID: 30417366     DOI: 10.1002/jcp.27530

Source DB:  PubMed          Journal:  J Cell Physiol        ISSN: 0021-9541            Impact factor:   6.384


  6 in total

1.  Identification of a novel prognostic signature for HCC and analysis of costimulatory molecule-related lncRNA AC099850.3.

Authors:  Qi Wang; Qiong Fang; Yanping Huang; Jin Zhou; Meimei Liu
Journal:  Sci Rep       Date:  2022-06-15       Impact factor: 4.996

2.  A ten N6-methyladenosine-related long non-coding RNAs signature predicts prognosis of triple-negative breast cancer.

Authors:  Jie Wu; Yan Cai; Gaiping Zhao; Maolan Li
Journal:  J Clin Lab Anal       Date:  2021-05-02       Impact factor: 2.352

3.  A novel lncRNA PLK4 up-regulated by talazoparib represses hepatocellular carcinoma progression by promoting YAP-mediated cell senescence.

Authors:  Yan Jia; Huanhuan Jin; Liyuan Gao; Xiang Yang; Feixia Wang; Hai Ding; Anping Chen; Shanzhong Tan; Feng Zhang; Jiangjuan Shao; Shijun Wang; Shizhong Zheng
Journal:  J Cell Mol Med       Date:  2020-04-03       Impact factor: 5.310

4.  A five lncRNA signature for prognosis prediction in hepatocellular carcinoma.

Authors:  Yongqiang Sun; Fangfang Zhang; Lifu Wang; Xueai Song; Jing Jing; Fan Zhang; Simiao Yu; Honghong Liu
Journal:  Mol Med Rep       Date:  2019-04-30       Impact factor: 2.952

5.  Integrative analysis of dysregulated lncRNA-associated ceRNA network reveals potential lncRNA biomarkers for human hepatocellular carcinoma.

Authors:  Chengyun Li; Wenwen Zhang; Hanteng Yang; Jilian Xiang; Xinghua Wang; Junling Wang
Journal:  PeerJ       Date:  2020-03-11       Impact factor: 2.984

6.  Long noncoding RNA ZFPM2-AS1 acts as a miRNA sponge and promotes cell invasion through regulation of miR-139/GDF10 in hepatocellular carcinoma.

Authors:  Hui He; Yawei Wang; Peng Ye; Dehui Yi; Ying Cheng; Haibo Tang; Zhi Zhu; Xun Wang; Shi Jin
Journal:  J Exp Clin Cancer Res       Date:  2020-08-14
  6 in total

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