Literature DB >> 30416263

Influence Function and Robust Variant of Kernel Canonical Correlation Analysis.

Md Ashad Alam1, Kenji Fukumizu2, Yu-Ping Wang1.   

Abstract

Many unsupervised kernel methods rely on the estimation of kernel covariance operator (kernel CO) or kernel cross-covariance operator (kernel CCO). Both are sensitive to contaminated data, even when bounded positive definite kernels are used. To the best of our knowledge, there are few well-founded robust kernel methods for statistical unsupervised learning. In addition, while the influence function (IF) of an estimator can characterize its robustness, asymptotic properties and standard error, the IF of a standard kernel canonical correlation analysis (standard kernel CCA) has not been derived yet. To fill this gap, we first propose a robust kernel covariance operator (robust kernel CO) and a robust kernel cross-covariance operator (robust kernel CCO) based on a generalized loss function instead of the quadratic loss function. Second, we derive the IF for robust kernel CCO and standard kernel CCA. Using the IF of the standard kernel CCA, we can detect influential observations from two sets of data. Finally, we propose a method based on the robust kernel CO and the robust kernel CCO, called robust kernel CCA, which is less sensitive to noise than the standard kernel CCA. The introduced principles can also be applied to many other kernel methods involving kernel CO or kernel CCO. Our experiments on both synthesized and imaging genetics data demonstrate that the proposed IF of standard kernel CCA can identify outliers. It is also seen that the proposed robust kernel CCA method performs better for ideal and contaminated data than the standard kernel CCA.

Entities:  

Keywords:  Influence function; Kernel (coss-) covariance operator; Kernel methods; Robustness; and Imaging genetics analysis

Year:  2018        PMID: 30416263      PMCID: PMC6223640          DOI: 10.1016/j.neucom.2018.04.008

Source DB:  PubMed          Journal:  Neurocomputing        ISSN: 0925-2312            Impact factor:   5.719


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Authors:  David R Hardoon; Sandor Szedmak; John Shawe-Taylor
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2.  A regularized kernel CCA contrast function for ICA.

Authors:  Carlos Alzate; Johan A K Suykens
Journal:  Neural Netw       Date:  2008-01-10

3.  Sparse canonical correlation analysis with application to genomic data integration.

Authors:  Elena Parkhomenko; David Tritchler; Joseph Beyene
Journal:  Stat Appl Genet Mol Biol       Date:  2009-01-06

4.  Robust kernel principal component analysis.

Authors:  Su-Yun Huang; Yi-Ren Yeh; Shinto Eguchi
Journal:  Neural Comput       Date:  2009-11       Impact factor: 2.026

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1.  Gene shaving using a sensitivity analysis of kernel based machine learning approach, with applications to cancer data.

Authors:  Md Ashad Alam; Mohammd Shahjaman; Md Ferdush Rahman; Fokhrul Hossain; Hong-Wen Deng
Journal:  PLoS One       Date:  2019-05-23       Impact factor: 3.240

2.  IRC-Fuse: improved and robust prediction of redox-sensitive cysteine by fusing of multiple feature representations.

Authors:  Md Mehedi Hasan; Md Ashad Alam; Watshara Shoombuatong; Hiroyuki Kurata
Journal:  J Comput Aided Mol Des       Date:  2021-01-04       Impact factor: 3.686

  2 in total

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