Literature DB >> 30411896

Plant Metabolomics: Evaluation of Different Extraction Parameters for Nontargeted UPLC-ESI-QTOF-Mass Spectrometry at the Example of White Asparagus officinalis.

Marina Creydt1, Maike Arndt1, Daria Hudzik1, Markus Fischer1.   

Abstract

The extraction of metabolites turns out to be one of the most important key factors for nontargeted metabolomics approaches as this step can significantly affects the informative value of the successive measurements. Compared to metabolomics experiments of various matrices of bacterial or mammalian origins, there are only few studies, which focus on different extraction methods for plant metabolomics analyses. In this study, various solvent extraction compositions were compared and assessed using an UPLC-ESI-QTOF-MS strategy. Exemplary, white asparagus ( Asparagus officinalis) were employed as a low-fat-, low-protein-, high-water-content model commodity with the objective of designing an optimal nontargeted extraction protocol for polar and nonpolar metabolites. Furthermore, the influence of acid addition, mechanical cell disruption methods (ball mill, ultrasonic bath, vortex mixer), and extract stability have been systematically scrutinized too. The different extraction protocols were compared based on sum of features, sum of peak intensities, sum of peak areas, as well as by analyzing individual signals of as many different substance groups as possible to obtain a maximum overview.

Entities:  

Keywords:  Asparagus officinalis; mass spectrometry; metabolite profiling; nontargeted; plant metabolomics; sample extraction

Mesh:

Substances:

Year:  2018        PMID: 30411896     DOI: 10.1021/acs.jafc.8b06037

Source DB:  PubMed          Journal:  J Agric Food Chem        ISSN: 0021-8561            Impact factor:   5.279


  5 in total

1.  Effects of extraction parameters on lipid profiling of mosses using UPLC-ESI-QTOF-MS and multivariate data analysis.

Authors:  Yi Lu; Finnur Freyr Eiriksson; Margrét Thorsteinsdóttir; Henrik Toft Simonsen
Journal:  Metabolomics       Date:  2021-10-20       Impact factor: 4.290

2.  Polar Lipids in Starch-Rich Commodities to be Analyzed with LC-MS-Based Metabolomics-Optimization of Ionization Parameters and High-Throughput Extraction Protocols.

Authors:  Christin Claassen; Jürgen Kuballa; Sascha Rohn
Journal:  Metabolites       Date:  2019-08-12

3.  Tissue-specific signatures of metabolites and proteins in asparagus roots and exudates.

Authors:  Stefanie Döll; Roxana Djalali Farahani-Kofoet; Rita Zrenner; Andrea Henze; Katja Witzel
Journal:  Hortic Res       Date:  2021-04-01       Impact factor: 6.793

4.  Research on Biomarkers of Different Growth Periods and Different Drying Processes of Citrus wilsonii Tanaka Based on Plant Metabolomics.

Authors:  Hui Yan; Zong-Jin Pu; Zhen-Yu Zhang; Gui-Sheng Zhou; Dong-Qian Zou; Sheng Guo; Chao Li; Zhi-Lai Zhan; Jin-Ao Duan
Journal:  Front Plant Sci       Date:  2021-07-14       Impact factor: 5.753

5.  Opening the Random Forest Black Box of the Metabolome by the Application of Surrogate Minimal Depth.

Authors:  Soeren Wenck; Marina Creydt; Jule Hansen; Florian Gärber; Markus Fischer; Stephan Seifert
Journal:  Metabolites       Date:  2021-12-21
  5 in total

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