| Literature DB >> 30405044 |
Myoung Su Park1, Ki Hwan Park2, Gyung Jin Bahk3.
Abstract
Climatic factors can affect the incidence of foodborne diseases (FBDs). Moreover, microbial network inference is useful for predicting the interrelationships between the incidence of FBDs and climatic factors. However, the interrelationships between FBD pathogens and most climatic factors are unknown. Using principal component analysis (PCA) and partial correlation coefficient matrices (PCCMs), we determined the intra-ecosystem interrelationship network of the multiple combined effects of 5 climatic factors (temperature, relative humidity, rainfall, insolation, and cloudiness) and the monthly incidences of 12 bacterial FBDs. Many FBD pathogens are interrelated with multiple combined factors. Salmonellosis has strong positive interrelationships with Vibrio parahaemolyticus and enterohemorrhagic Escherichia coli, and the interrelationships between Staphylococcus aureus/enteropathogenic E. coli/enterotoxigenic E. coli exhibits a typical triangular pattern with the combined effects of all 5 climatic factors. Meanwhile, campylobacteriosis and Clostridium perfringens infections are negatively interrelated with insolation and cloudiness. Enteroinvasive E. coli, Bacillus cereus, Listeria spp., and Yersinia enterocolitica are significantly interrelated with any climatic factor combination. The interrelationships or higher-order interrelationships among these climatic factors play an important role in the incidence of FBDs, although the underlying mechanisms remain unclear. Our results will serve as a foundation for more sophisticated models of future FBD patterns with regard to climate change.Entities:
Keywords: South Korea; climatic factors; foodborne disease; interrelationship; network
Mesh:
Year: 2018 PMID: 30405044 PMCID: PMC6266029 DOI: 10.3390/ijerph15112482
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Partial correlation coefficients (r) of 12 bacterial FBD pathogens with respect to 3 climatic variable groups.
| Variables | SAL | EPEC | ETEC | EIEC | EHEC | CAM | STA | CLP | VBR | LIS | BAC | YER | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
| 1.000 | |||||||||||
|
| −0.065 | 1.000 | |||||||||||
|
| 0.078 | 0.330 | 1.000 | ||||||||||
|
| −0.016 | 0.056 | −0.139 | 1.000 | |||||||||
|
| 0.116 | 0.055 | 0.147 | 0.129 | 1.000 | ||||||||
|
| −0.102 | −0.126 | −0.179 | 0.079 | −0.135 | 1.000 | |||||||
|
| 0.133 | 0.360 | 0.346 | −0.029 | −0.063 | −0.099 | 1.000 | ||||||
|
| −0.030 | −0.052 | −0.150 | 0.017 | 0.002 | 0.038 | −0.140 | 1.000 | |||||
|
| 0.285 | 0.017 | 0.018 | 0.210 | 0.084 | −0.147 | 0.275 | −0.289 | 1.000 | ||||
|
| −0.066 | 0.180 | 0.073 | 0.023 | −0.001 | −0.221 | 0.252 | −0.005 | 0.170 | 1.000 | |||
|
| −0.009 | −0.021 | 0.050 | 0.035 | 0.037 | 0.077 | −0.093 | −0.024 | 0.141 | −0.046 | 1.000 | ||
|
| −0.093 | −0.040 | 0.038 | −0.080 | −0.070 | −0.040 | −0.069 | −0.047 | −0.125 | −0.073 | −0.141 | 1.000 | |
|
|
| 1.000 | |||||||||||
|
| −0.120 | 1.000 | |||||||||||
|
| 0.237 | 0.294 | 1.000 | ||||||||||
|
| 0.044 | 0.048 | −0.118 | 1.000 | |||||||||
|
| 0.390 | 0.009 | 0.227 | 0.145 | 1.000 | ||||||||
|
| 0.473 | −0.161 | 0.022 | 0.104 | 0.169 | 1.000 | |||||||
|
| 0.136 | 0.350 | 0.352 | −0.024 | −0.029 | −0.030 | 1.000 | ||||||
|
| 0.084 | −0.064 | −0.114 | 0.025 | 0.054 | 0.112 | −0.130 | 1.000 | |||||
|
| 0.542 | −0.035 | 0.132 | 0.216 | 0.267 | 0.220 | 0.273 | −0.187 | 1.000 | ||||
|
| −0.065 | 0.182 | 0.063 | 0.021 | −0.014 | −0.189 | 0.249 | −0.009 | 0.132 | 1.000 | |||
|
| −0.132 | −0.005 | 0.010 | 0.024 | −0.031 | −0.045 | −0.103 | −0.044 | 0.043 | −0.040 | 1.000 | ||
|
| −0.159 | −0.027 | 0.006 | −0.087 | −0.116 | −0.115 | −0.078 | −0.063 | −0.172 | −0.068 | −0.118 | 1.000 | |
|
|
| 1.000 | |||||||||||
|
| −0.023 | 1.000 | |||||||||||
|
| 0.195 | 0.329 | 1.000 | ||||||||||
|
| −0.038 | 0.055 | −0.143 | 1.000 | |||||||||
|
| 0.492 | 0.061 | 0.230 | 0.083 | 1.000 | ||||||||
|
| −0.394 | −0.125 | −0.245 | 0.087 | −0.362 | 1.000 | |||||||
|
| 0.202 | 0.360 | 0.366 | −0.035 | 0.039 | −0.157 | 1.000 | ||||||
|
| −0.285 | −0.059 | −0.208 | 0.029 | −0.210 | 0.196 | −0.185 | 1.000 | |||||
|
| 0.383 | 0.024 | 0.069 | 0.192 | 0.222 | −0.248 | 0.303 | −0.356 | 1.000 | ||||
|
| −0.029 | 0.180 | 0.075 | 0.022 | 0.012 | −0.207 | 0.253 | −0.013 | 0.170 | 1.000 | |||
|
| 0.051 | −0.019 | 0.064 | 0.032 | 0.075 | 0.033 | −0.080 | −0.051 | 0.156 | −0.044 | 1.000 | ||
|
| 0.030 | −0.036 | 0.062 | −0.084 | 0.018 | −0.093 | −0.048 | −0.089 | −0.086 | −0.069 | −0.130 | 1.000 |
r: magnitude of a partial correlation coefficient between 2 variables: i and j. PC1: temperature, relative humidity, and rainfall, PC2: insolation and cloudiness. BAC: B. cereus; CAM: campylobacteriosis; CLP: C. perfringens; LIS: Listeria spp.; SAL: salmonellosis; EPEC, ETEC, EIEC, EHEC: pathogenic E. coli infection by enteropathogenic, enterotoxigenic, enteroinvasive, enterohemorrhagic E. coli, respectively; STA: S. aureus; VBR: V. parahaemolyticus; YER: Y. enterocolitica infection.
Partial correlation coefficients matrix transformed to Z-terms (Z/2) of 12 bacterial FBD pathogens with respect to 3 climatic variable groups.
| Variables | SAL | EPEC | ETEC | EIEC | EHEC | CAM | STA | CLP | VBR | LIS | BAC | YER | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
| ||||||||||||
|
| −0.56 | ||||||||||||
|
| 1.61 | 2.37 * | |||||||||||
|
| 0.00 | 0.38 | −0.99 | ||||||||||
|
| 3.58 ** | 0.29 | 1.80 | 0.85 | |||||||||
|
| 0.32 | −1.06 | −0.91 | 0.72 | −0.78 | ||||||||
|
| 1.29 | 2.76 ** | 2.85 ** | −0.22 | −0.01 | −0.69 | |||||||
|
| −0.57 | −0.45 | −1.20 | 0.20 | −0.53 | 1.10 | −1.17 | ||||||
|
| 4.10 ** | −0.04 | 0.77 | 1.55 | 1.89 | −0.14 | 2.24 * | −2.12 * | |||||
|
| −0.41 | 1.37 | 0.52 | 0.16 | 0.00 | −1.57 | 1.92 | −0.08 | 1.12 | ||||
|
| −0.28 | −0.09 | 0.27 | 0.21 | 0.20 | 0.03 | −0.69 | −0.34 | 0.72 | −0.32 | |||
|
| −0.60 | −0.24 | 0.25 | −0.64 | −0.37 | −0.68 | −0.47 | −0.55 | −0.98 | −0.52 | −0.95 | ||
|
|
| ||||||||||||
|
| −0.90 | ||||||||||||
|
| 1.81 | 2.27 * | |||||||||||
|
| 0.33 | 0.36 | −0.89 | ||||||||||
|
| 3.08 ** | 0.07 | 1.73 | 1.09 | |||||||||
|
|
| −1.22 | 0.17 | 0.78 | 1.28 | ||||||||
|
| 1.02 | 2.74 ** | 2.75 ** | −0.18 | −0.22 | −0.22 | |||||||
|
| 0.63 | −0.48 | −0.86 | 0.19 | 0.40 | 0.84 | −0.98 | ||||||
|
| 4.54 ** | −0.26 | 0.99 | 1.64 |
| 1.67 | 2.10 * | −1.42 | |||||
|
| −0.49 | 1.38 | 0.47 | 0.16 | −0.10 | −1.43 | 1.91 | −0.07 | 1.00 | ||||
|
| −1.00 | −0.04 | 0.07 | 0.18 | −0.23 | −0.33 | −0.77 | −0.33 | 0.32 | −0.30 | |||
|
| −1.20 | −0.20 | 0.04 | −0.66 | −0.87 | −0.86 | −0.58 | −0.47 | −1.30 | −0.51 | −0.88 | ||
|
|
| ||||||||||||
|
| −0.17 | ||||||||||||
|
| 1.48 | 2.55 * | |||||||||||
|
| −0.29 | 0.41 | −1.08 | ||||||||||
|
| 4.03 ** | 0.46 | 1.76 | 0.62 | |||||||||
|
|
| −0.94 | −1.87 | 0.65 |
| ||||||||
|
| 1.54 | 2.82 ** | 2.87 ** | −0.26 | 0.29 | −1.18 | |||||||
|
|
| −0.44 | −1.58 | 0.22 | −1.60 | 1.49 | −1.40 | ||||||
|
| 3.02 ** | 0.18 | 0.52 | 1.46 | 1.69 | −1.89 | 2.34 * |
| |||||
|
| −0.22 | 1.36 | 0.56 | 0.17 | 0.09 | −1.57 | 1.93 | −0.09 | 1.28 | ||||
|
| 0.38 | −0.14 | 0.48 | 0.24 | 0.57 | 0.25 | −0.60 | −0.38 | 1.18 | −0.33 | |||
|
| 0.23 | −0.27 | 0.46 | −0.63 | 0.13 | −0.70 | −0.36 | −0.67 | −0.65 | −0.52 | −0.98 |
PC1: temperature, relative humidity, and rainfall; PC2: insolation and cloudiness. BAC: B. cereus; CAM: campylobacteriosis; CLP: C. perfringens; LIS: Listeria spp.; SAL: salmonellosis; EPEC, ETEC, EIEC, EHEC: pathogenic E. coli infection by enteropathogenic, enterotoxigenic, enteroinvasive, enterohemorrhagic E. coli, respectively; STA: S. aureus; VBR: V. parahaemolyticus; YER: Y. enterocolitica infection. * p < 0.05; ** p < 0.01. Bold italics: coefficients altered by 3 conditional climatic variable groups (PC1 + PC2 to PC1 to PC2). Colored cells indicate significant interrelationships. Orange: 7 interrelationships under PC1 + PC2; purple: 2 added (SAL-CAM and EHEC-VBR) interrelationships under PC1; blue: 4 (3 added (SAL-CLP, EHEC-CAM, and CLP-VBR) and 1 changed (SAL-CAM)) interrelationships under PC2.
Figure 1Boxplot of principal component analysis (PCA) of 5 climatic variables in South Korea from January 2011 to December 2015. PC1 (temperature, relative humidity, and rainfall) and PC2 (insolation and cloudiness) accounted for 65.2% and 21.2% of the total variance, respectively.
Figure 2Microbial interrelationship network inferred from the monthly incidence of 12 bacterial FBDs according to climatic variables. Nodes represent the incidence of a bacterial FBD; the size indicates the number of cases per year. Lines represent significant pairwise associations between pathogens; thick and thin lines: p < 0.01 and <0.05, respectively. Red, purple, and blue lines show the interrelationship under the 3 conditional climatic variables: PC1 + PC2, PC1, and PC2, respectively. BAC: B. cereus; CAM: campylobacteriosis; CLP: C. perfringens; LIS: Listeria spp.; SAL: salmonellosis; EPEC, ETEC, EIEC, EHEC: pathogenic infection by enteropathogenic, enterotoxigenic, enteroinvasive, enterohemorrhagic E. coli, respectively; STA: S. aureus; VBR: V. parahaemolyticus; YER: Y. enterocolitica infection.