| Literature DB >> 30400028 |
Dario de Biase1, Federica Torricelli2, Moira Ragazzi3, Benedetta Donati2, Elisabetta Kuhn3, Michela Visani4, Giorgia Acquaviva4, Annalisa Pession1, Giovanni Tallini4, Simonetta Piana3, Alessia Ciarrocchi2.
Abstract
Anaplastic thyroid cancer (ATC) is a rare but highly aggressive form of thyroid cancer. By contrast, differentiated papillary thyroid cancer (PTC) only rarely behave aggressively and develop distant metastasis. Whether distantly metastatic PTC (DM-PTC) and ATC share a common genetic background is still to be defined. We used next-generation sequencing (NGS) to explore the genetic background of a cohort of ATC and DM-PTC and a group of well-differentiated PTCs that did not developed distant metastasis as control (ctrl-PTC). A panel of 128 amplicons within 21 thyroid cancer-related genes was analyzed in a set of 151 thyroid cancer samples including 66 ATCs and DM-PTCs. We showed that the ATC/DM-PTC group had an overall mutational load higher than ctrl-PTCs and that ATCs and DM-PTCs are characterized by a different genetic background, with the exception of mutations in the TERT promoter that were overrepresented in both ATCs (61.1%) and DM-PTCs (48.2%) vs non-aggressive ctrl-PTCs (7.6%). In ATCs, TERT promoter mutations were frequently associated with TP53 mutations, while in the DM-PTCs no significant co-occurrence was observed. No significant association of MED12 mutations with aggressiveness of thyroid cancer was observed in our analysis. Finally, correlation analysis showed that increasing number of mutations negatively impact on patient overall survival also within the ATC and DM-PTC group. In conclusions, overall our analysis further highlights the relevance of TERT promoter mutations in driving aggressiveness and provides new pieces of information in the definition of aggressiveness evolution of thyroid cancer lesions.Entities:
Keywords: MED12 mutations; TERT promoter mutations; anaplastic thyroid cancer; genetic profile; highly aggressive thyroid cancer; papillary thyroid cancer
Year: 2018 PMID: 30400028 PMCID: PMC6280609 DOI: 10.1530/EC-18-0386
Source DB: PubMed Journal: Endocr Connect ISSN: 2049-3614 Impact factor: 3.335
Clinicopathological features of cases analyzed by NGS.
| Group | Num of cases | Age (mean) (years) | Sex | Histology | Fu (range) | FU (event) |
|---|---|---|---|---|---|---|
| DM-PTC | 29 | 53.0 | 11 M18 F | 17 C-PTC8 TCV-PTC3 FV-PTC1 ST-PTC | 101.7 ms (24–234) | 15 DOD11 AWD2 NED1 NA |
| ATC | 18 | 70.6 | 7 M11 F | 18 ATC | 27.9 ms (1–195) | 11 DOD1 AWD2 DOC4 NA |
| HA-TC | 47 | 59.7 | 18 M29 F | 17 C-PTC8 TCV-PTC3 FV-PTC1 ST-PTC18 ATC | 69.3 ms (1–234) | 26 DOD12 AWD2 DOC |
| N0 | 32 | 54.9 | 6 M26 F | 25 C-PTC2 TCV-PTC4 FV-PTC1 ST-PTC | 136.3 ms (77–216) | 30 NED2 NA |
| N1 | 34 | 49.1 | 13 M21 F | 24 C-PTC6 TCV-PTC4 FV-PTC | 157.2 ms (85–373) | 5 AWD25 NED4 DOC |
| ctrl-PTCs | 66 | 19 M47 F | 49 C-PTC8 TCV-PTC8 FV-PTC1 ST-PTC | 142.1 ms (77–373) | 5 AWD55 NED4 DOC2 NA |
ATC, anaplastic thyroid carcinoma; AWD, alive with disease; C-PTC, classic papillary thyroid carcinoma; ctrl-PTCs, control group (N0 + N1); DM-PTC, distantly metastatic PTC; DOC, dead of other cause; DOD, dead of disease; F, female; FU, follow-up; FV, follicular variant; HA-TC, highly aggressive thyroid carcinoma (DM-PTC + ATC); M, male; ms, months; N0, no lymph nodal involvement at presentation; N1, lymph nodal involvement at presentation; NA, not available; NED, not evidence of disease; ST, solid trabecular; TCV, tall-cell variant.
Figure 1Summary of genetic mutations found in 113 samples analyzed. (A) Represents HA-TCs while (B) represents ctrl-PTCs. Different colors were used for the different tumor subtypes: blue for DM-PTC, red for ATC, green for N0 and yellow for N1.
Figure 2Percentage of mutated samples for each group (A). Distribution of samples according to the number of mutations displayed (B). Allelic frequency percentage in ctrl-TC and in HA-TC groups (C) and in DM-PTC and ATC groups (D). Type of mutation according to the type of nucleotide substitution (E). Schematic representation of TERT and BRAF mutations distribution in HA-TC and ctrl-PTC samples (F). Occurrence of MED12 mutations in HA-TC (G) and ctrl-PTC samples (H).
Contingency tables of relevant gene mutations.
| DM-PTC (29) | ATC (18) | DM-PTC + ATC (47) | N0 + N1 (66) | |||
|---|---|---|---|---|---|---|
| % | % | % | % | |||
| 0.017 | 0.047 | |||||
| 62.01 (18) | 94.4 (17) | 74.5 (35) | 54.5 (36) | |||
| 37.9 (11) | 5.6 (1) | 25.5 (12) | 45.5 (30) | |||
| 0.283 | 0.158 | |||||
| 96.5 (28) | 83.3 (15) | 91.5 (43) | 98.5 (65) | |||
| 3.5 (1) | 16.6 (3) | 8.5 (4) | 1.5 (1) | |||
| 0.517 | 0.069 | |||||
| 93.1 (27) | 100 (18) | 95.7 (45) | 83.3 (55) | |||
| 6.9 (2) | 0 (0) | 4.3 (2) | 16.7 (11) | |||
| 0.517 | 0.118 | |||||
| 93.1 (27) | 100 (18) | 95.7 (45) | 86.4 (57) | |||
| 6.9 (2) | 0 (0) | 4.3 (2) | 13.6 (9) | |||
| 0.549 | <0.0001 | |||||
| 51.7 (15) | 38.9 (7) | 46.8 (22) | 92.4 (61) | |||
| 48.3 (14) | 61.1 (11) | 53.1 (25) | 7.6 (5) | |||
| <0.0001 | 0.001 | |||||
| 100 (29) | 38.9 (7) | 76.6 (36) | 97 (64) | |||
| 0 (0) | 61.1 (11) | 23.4 (11) | 3 (2) |
Significance of differences on mutation frequency for the indicated genes was evaluated by Fisher exact test.
Figure 3Differential distribution of HA-TC and ctrl-PTC samples according to the number of mutations (A). Frequency of mutated samples for each gene in HA-TC, DM-PTC and ctrl-PTC samples (B). Representation of concomitant mutations in the three most frequently altered genes (TERT, BRAF and TP53) in DM-PTC (C) and ATC (D).
Figure 4Kaplan–Meier plots for association number of mutations with patient survival in the overall cohort of 113 thyroid cancer analyzed (A) and restricted to the HA-TC subset (B). MUT, mutations; NMD, no detected mutations.