Literature DB >> 30389820

Optimized Feature Extraction for Radiomics Analysis of 18F-FDG PET Imaging.

Laszlo Papp1, Ivo Rausch2, Marko Grahovac3, Marcus Hacker3, Thomas Beyer2.   

Abstract

Radiomics analysis of 18F-FDG PET/CT images promises well for an improved in vivo disease characterization. To date, several studies have reported significant variations in textural features due to differences in patient preparation, imaging protocols, lesion delineation, and feature extraction. Our objective was to study variations in features before a radiomics analysis of 18F-FDG PET data and to identify those feature extraction and imaging protocol parameters that minimize radiomic feature variations across PET imaging systems.
Methods: A whole-body National Electrical Manufacturers Association image-quality phantom was imaged with 13 PET/CT systems at 12 different sites following local protocols. We selected 37 radiomic features related to the 4 largest spheres (17-37 mm) in the phantom. On the basis of a combined analysis of voxel size, bin size, and lesion volume changes, feature and imaging system ranks were established. A 1-way ANOVA was performed over voxel size, bin size, and lesion volume subgroups to identify the dependency and the trend change in feature variations across these parameters.
Results: Feature ranking revealed that the gray-level cooccurrence matrix and shape features are the least sensitive to PET imaging system variations. Imaging system ranking illustrated that the use of point-spread function, small voxel sizes, and narrow gaussian postfiltering helped minimize feature variations. ANOVA subgroup analysis indicated that variations in each of the 37 features and for a given voxel size and bin size can be minimized.
Conclusion: Our results provide guidance to selecting optimized features from 18F-FDG PET/CT studies. We were able to demonstrate that feature variations can be minimized for selected image parameters and imaging systems. These results can help imaging specialists and feature engineers in increasing the quality of future radiomics studies involving PET/CT.
© 2019 by the Society of Nuclear Medicine and Molecular Imaging.

Entities:  

Keywords:  18F-FDG PET/CT; feature extraction; radiomics

Year:  2018        PMID: 30389820     DOI: 10.2967/jnumed.118.217612

Source DB:  PubMed          Journal:  J Nucl Med        ISSN: 0161-5505            Impact factor:   10.057


  17 in total

1.  Extracting and Selecting Robust Radiomic Features from PET/MR Images in Nasopharyngeal Carcinoma.

Authors:  Pengfei Yang; Lei Xu; Zuozhen Cao; Yidong Wan; Yi Xue; Yangkang Jiang; Eric Yen; Chen Luo; Jing Wang; Yi Rong; Tianye Niu
Journal:  Mol Imaging Biol       Date:  2020-12       Impact factor: 3.488

2.  Imager-4D: New Software for Viewing Dynamic PET Scans and Extracting Radiomic Parameters from PET Data.

Authors:  Steven P Rowe; Lilja B Solnes; Yafu Yin; Grant Kitchen; Martin A Lodge; Nicolas A Karakatsanis; Arman Rahmim; Martin G Pomper; Jeffrey P Leal
Journal:  J Digit Imaging       Date:  2019-12       Impact factor: 4.056

3.  Analysis of Cross-Combinations of Feature Selection and Machine-Learning Classification Methods Based on [18F]F-FDG PET/CT Radiomic Features for Metabolic Response Prediction of Metastatic Breast Cancer Lesions.

Authors:  Ober Van Gómez; Joaquin L Herraiz; José Manuel Udías; Alexander Haug; Laszlo Papp; Dania Cioni; Emanuele Neri
Journal:  Cancers (Basel)       Date:  2022-06-14       Impact factor: 6.575

4.  Improved Prognosis of Treatment Failure in Cervical Cancer with Nontumor PET/CT Radiomics.

Authors:  Tahir I Yusufaly; Jingjing Zou; Tyler J Nelson; Casey W Williamson; Aaron Simon; Meenakshi Singhal; Hannah Liu; Hank Wong; Cheryl C Saenz; Jyoti Mayadev; Michael T McHale; Catheryn M Yashar; Ramez Eskander; Andrew Sharabi; Carl K Hoh; Sebastian Obrzut; Loren K Mell
Journal:  J Nucl Med       Date:  2021-10-28       Impact factor: 11.082

Review 5.  Functional imaging using radiomic features in assessment of lymphoma.

Authors:  Marius E Mayerhoefer; Lale Umutlu; Heiko Schöder
Journal:  Methods       Date:  2020-07-04       Impact factor: 3.608

6.  Experimental Multicenter and Multivendor Evaluation of the Performance of PET Radiomic Features Using 3-Dimensionally Printed Phantom Inserts.

Authors:  Elisabeth Pfaehler; Joyce van Sluis; Bram B J Merema; Peter van Ooijen; Ralph C M Berendsen; Floris H P van Velden; Ronald Boellaard
Journal:  J Nucl Med       Date:  2019-08-16       Impact factor: 11.082

7.  Noise-Based Image Harmonization Significantly Increases Repeatability and Reproducibility of Radiomics Features in PET Images: A Phantom Study.

Authors:  Harald Keller; Tina Shek; Brandon Driscoll; Yiwen Xu; Brian Nghiem; Sadek Nehmeh; Milan Grkovski; Charles Ross Schmidtlein; Mikalai Budzevich; Yoganand Balagurunathan; John J Sunderland; Reinhard R Beichel; Carlos Uribe; Ting-Yim Lee; Fiona Li; David A Jaffray; Ivan Yeung
Journal:  Tomography       Date:  2022-04-13

Review 8.  Introduction to Radiomics.

Authors:  Marius E Mayerhoefer; Andrzej Materka; Georg Langs; Ida Häggström; Piotr Szczypiński; Peter Gibbs; Gary Cook
Journal:  J Nucl Med       Date:  2020-02-14       Impact factor: 11.082

9.  Repeatability of 18F-FDG PET Radiomic Features in Cervical Cancer.

Authors:  John P Crandall; Tyler J Fraum; MinYoung Lee; Linda Jiang; Perry Grigsby; Richard L Wahl
Journal:  J Nucl Med       Date:  2020-10-02       Impact factor: 10.057

10.  Robustness of radiomic features in magnetic resonance imaging: review and a phantom study.

Authors:  Renee Cattell; Shenglan Chen; Chuan Huang
Journal:  Vis Comput Ind Biomed Art       Date:  2019-11-20
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