Literature DB >> 30388588

Stereo-preference of camphor for H-bonding with phenol, methanol and chloroform: A combined matrix isolation IR spectroscopic and quantum chemical investigation.

Pujarini Banerjee1, Prasenjit Pandey2, Biman Bandyopadhyay3.   

Abstract

Camphor is known to be held in the substrate pocket of cytochrome P450cam enzyme via H-bond with a tyrosine residue of the enzyme in a unique orientation. This structural exclusivity results in regio- and stereo-specific hydroxylation of camphor by the enzyme. We have carried out a combined IR spectroscopic and quantum chemical investigation to shed light on the factors influencing the conformational exclusivity of 1R-(+)-camphor in the substrate pocket of Cytochrome P450cam, and to determine whether the selectivity is an inherent property of the substrate itself, or is imposed by the enzyme. For this purpose, complexes of camphor have been studied with three H-bond donors namely phenol, methanol and chloroform. Each of the three donors was found to form stable complexes with two distinct conformers; the one mimicking the conformation in enzyme substrate pocket was found to be more stable of the two, for all three donors. Experimentally, both conformers of the H-bonded complexes were identified separately for phenol and methanol in an argon matrix at 8 K, but not for chloroform due to very small energy barrier for interconversion of the two conformers. In room temperature solution phase spectra of camphor with all three donors, the differences in spectral attributes between the two isomeric H-bonded complexes were lost due to thermal motions.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Atoms in molecule; Conformational preference; Cytochrome P450cam; H-bonding; Matrix isolation IR spectroscopy; Natural bond orbital

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Year:  2018        PMID: 30388588     DOI: 10.1016/j.saa.2018.10.031

Source DB:  PubMed          Journal:  Spectrochim Acta A Mol Biomol Spectrosc        ISSN: 1386-1425            Impact factor:   4.098


  1 in total

1.  Pinacolone-Alcohol Gas-Phase Solvation Balances as Experimental Dispersion Benchmarks.

Authors:  Charlotte Zimmermann; Taija L Fischer; Martin A Suhm
Journal:  Molecules       Date:  2020-11-03       Impact factor: 4.411

  1 in total

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