| Literature DB >> 30386588 |
Stuart Young1,2, Johanna Rode-Margono3, Rajan Amin4.
Abstract
Improving technology and increasing affordability mean that camera trapping-the use of remotely triggered cameras to photograph wildlife-is becoming an increasingly common tool in the monitoring and conservation of wild populations. Each camera trap study generates a vast amount of data, which need to be processed and labeled before analysis. Traditionally, processing camera trap data has been performed manually by entering data into a spreadsheet. This is time-consuming, prone to human error, and data management may be inconsistent between projects, hindering collaboration. Recently, several programs have become available to facilitate and quicken data processing. Here, we review available software and assess their ability to better standardize camera trap data management and facilitate data sharing and collaboration. To identify available software for camera trap data management, we used internet searches and contacted researchers and practitioners working on large camera trap projects, as well as software developers. We tested all available programs against a range of software characteristics in addition to their ability to record a suite of important data variables extracted from images. We identified and reviewed 12 available programs for the management of camera trap data. These ranged from simple software assisting with the extraction of metadata from an image, through to comprehensive programs that facilitate data entry and analysis. Many of the programs tested were developed for use on specific studies and so do not cover all possible software or data collection requirements that different projects may have. We highlight the importance of a standardized software solution for camera trap data management. This approach would allow all possible data to be collected, enabling researchers to share data and contribute to other studies, as well as facilitating multi-project comparisons. By standardizing camera trap data collection and management in this way, future studies would be better placed to guide conservation policy on a global level.Entities:
Keywords: big data; camera trap data management; camera trapping; data annotation; data storage; ecological monitoring; metadata; standardization
Year: 2018 PMID: 30386588 PMCID: PMC6202726 DOI: 10.1002/ece3.4464
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Software characteristics and features of tested camera trap data management programs, as well as image variables that tested programs are able to record and process. —represents “no”, or the absence of a feature
| Renamer & CamTrap | ViXeN | Aardwolf | Camelot | Snoopy | Wild.ID | Camera Base | CPW Photo Warehouse | eMammal | camtrapR | TRAPPER | Agouti | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| General features | ||||||||||||
| Operating system | Windows | Windows, MacOS | Windows, MacOS, Linux | Windows, Linux | Windows, MacOS | Windows | Windows | Windows | Windows, MacOS | Windows, MacOS, Linux | Windows, MacOS, Linux | Windows |
| Installation requirements | .exe | .exe | mySQL | mySQL | mySQL | Java | MS Access | MS Access | Internet access | R | Internet access, see website | Internet access |
| Requires coding skills | Yes | – | – | – | – | – | – | – | – | Yes (R) | – | – |
| Open source | Yes | Yes | Yes | – | – | – | – | – | – | Yes | Yes | – (but open to partners) |
| Web‐based | – | – | – | – | – | – | – | – | Yes | – | Yes | Yes |
| Data storage | Local | Local | Local | Local | Local | Local | Local | Local | Cloud | Local | Server–based | Cloud |
| Image storage capacity | Unlimited | c. 1,000,000 | Unlimited | Unlimited | Unlimited | Unlimited | c. 2,000,000 | c. 2,000,000 | Unlimited | Unlimited | Unlimited | Unlimited |
| Functionality | ||||||||||||
| Automatic metadata import | – | – | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes |
| Still/moving images | Still | Still | Still | Both | Both | Still | Both | Still | Still | Still | Both | Still |
| In‐built media viewer | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | – | Yes | Yes |
| Batch ID | – | – | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes |
| Capture intervals | – | – | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes |
| Filter/query data | – | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes |
| Record active days | Yes | – | – | Yes | – | Yes | Yes | Yes | – | Yes | Yes | Yes |
| Automatic subject detection | – | – | – | – | Planned | – | – | – | Yes | – | – | – |
| Automatic species recognition | – | – | – | – | Planned | – | – | – | Yes | – | – | – |
| In‐built mapping | – | – | – | – | – | – | Yes | – | – | Yes | Yes | Yes |
| In app analysis | – | – | – | – | – | – | – | – | – | Yes | – | – |
| Generation of standard reports | Yes | – | Yes | Yes | – | – | Yes | Yes | Yes | – | – | – |
| Generate input files | .csv | – | – | .csv | Yes | – | .csv | .csv | .csv | .csv | .csv | .csv |
| Recordable data | ||||||||||||
| Camera make/model | Yesp | Yesp | Yes | – | Yes | Yes | Yes | – | – | Yes | Yeso | Yes |
| Drop down species list | – | – | Yes | Yes | Yes | Yes | Yes | Yes | Yes | – | Yeso | Yes |
| Multiple species | – | Yes | Yes | Yes | Yes | Yes | – | Yes | Yes | Yes | Yeso | Yes |
| ID individuals | – | – | Yes | – | Yes | Yes | Yes | Yes | Yes | Yes | Yeso | Yes |
| Group size | – | – | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yeso | Yes |
| Age/sex classes per ID | – | – | Yes | Yes | Yes | – | Sex only | Notes | Yes | Yes | Yeso | Yes |
| Behavior per ID | – | – | Yes | – | – | – | – | – | – | Yes | Yeso | Yes |
| Weather variables | – | – | Yes | – | Yes | – | – | – | – | Yes | Yeso | – |
| Moon phase | – | – | Yes | – | Yes | Yes | – | – | – | Yes | Yeso | – |
| Sunrise/sunset | – | – | Yes | – | Yes | – | Yes | – | – | Yes | Yeso | – |
| Location variables | – | – | Yes | Yes | Yes | – | – | – | – | Yes | Yeso | – |
| Latitude/longitude | – | – | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yes | Yeso | Yes |
| Altitude | – | – | Yes | – | Yes | – | – | – | – | Yes | Yeso | Yes |
| Spatial (habitat) characteristics | – | – | Yes | Yes | – | – | – | – | – | Yes | Yes | – |
| Support | ||||||||||||
| Multiple/shareable users | – | – | – | Yes | – | – | – | Yes | Yes | Yes | Yes | Yes |
| Crowd source IDs | – | – | – | – | – | – | – | Yes | – | Yes | Yes | Yes |
| Help/support | User manual | User manual | – | User manual, forum | User manual | User manual | User manual | User manual | Forum | Forum | Forum | User manual |
| Subscription fee? | – | – | – | – | – | – | – | – | Yes | – | – | Yes (to be discussed) |
| Reference | Harris et al. ( | Ramachandran and Devarajan ( | Krishnappa and Turner ( | Hendry and Mann ( | Smedley and Terdal ( | Fegraus et al. ( | Tobler ( | Ivan and Newkirk ( | Forrester et al. ( | Niedballa et al. ( | Bubnicki et al. ( | |
aG. Harris & J. Sanderson; smallwildcats.com/camera‐trap‐instructions bK. Devarajan & P. Ramachandran; github.com/vixen‐project/vixen cUniversity of Oslo; github.com/yathin/aardwolf2 dFlora & Fauna International – Vietnam; gitlab.com/camelot‐project eR. Smedley; tulsasoftdb.com/snoopy fTEAM Network; wildid.teamnetwork.org gSan Diego Zoo Global Institute for Conservation Research; http://www.atrium-biodiversity.org/tools/camerabase hColorado Parks & Wildlife; cpw.state.co.us/learn/Pages/ResearchMammalsSoftware.aspxiSmithsonian Institution; emammal.si.edu/ jLeibniz Institute for Zoo and Wildlife Research; cran.r‐project.org/web/packages/camtrapR kMammal Research Institute of the Polish Academy of Sciences; bitbucket.org/trapper‐project/trapper‐project lWageningen University; agouti.eu. mUsers can program via application programming interface (API). nComma separated values. oTRAPPER enables user to define any variable via API. pCamera trap make and model (and other information) can be added using custom metadata.