Literature DB >> 30384894

Long Noncoding RNAs in Atherosclerosis: JACC Review Topic of the Week.

Zhengyi Zhang1, David Salisbury1, Tamer Sallam2.   

Abstract

Atherosclerosis is a complex and chronic disease characterized by lipid deposition in the vessel wall that leads to an inflammatory and proliferative cascade involving smooth muscle, endothelial, and immune cells. Despite substantial improvements in our understanding of mechanisms contributing to atherosclerosis and overall reduction in cardiovascular mortality, the absolute disease burden remains substantially high. The recent discovery of a new group of mediators known as long noncoding ribonucleic acids (lncRNAs) offers a unique opportunity for the development of novel diagnostic and therapeutic tools in atherothrombotic disease. A number of studies suggest that lncRNAs are important mediators in health and disease, and rapidly accumulating evidence implicates lncRNAs in regulatory circuits controlling atherosclerosis. In this review, the authors outline important contributions of lncRNAs to atherosclerosis and its associated risk factors, including hypercholesterolemia, diabetes, hypertension, and obesity.
Copyright © 2018 American College of Cardiology Foundation. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  arteriosclerosis; bioinformatics; genetic knockout models; genetics; noncoding RNA

Mesh:

Substances:

Year:  2018        PMID: 30384894      PMCID: PMC6260928          DOI: 10.1016/j.jacc.2018.08.2161

Source DB:  PubMed          Journal:  J Am Coll Cardiol        ISSN: 0735-1097            Impact factor:   24.094


  67 in total

1.  Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.

Authors:  Moran N Cabili; Cole Trapnell; Loyal Goff; Magdalena Koziol; Barbara Tazon-Vega; Aviv Regev; John L Rinn
Journal:  Genes Dev       Date:  2011-09-02       Impact factor: 11.361

2.  Long Noncoding RNA Meg3 Controls Endothelial Cell Aging and Function: Implications for Regenerative Angiogenesis.

Authors:  Reinier A Boon; Patrick Hofmann; Katharina M Michalik; Noelia Lozano-Vidal; Denise Berghäuser; Ariane Fischer; Andrea Knau; Nicolas Jaé; Christoph Schürmann; Stefanie Dimmeler
Journal:  J Am Coll Cardiol       Date:  2016-12-13       Impact factor: 24.094

3.  Variants on chromosome 9p21.3 correlated with ANRIL expression contribute to stroke risk and recurrence in a large prospective stroke population.

Authors:  Weili Zhang; Yu Chen; Peng Liu; Jingzhou Chen; Lei Song; Yue Tang; Yuyao Wang; Jibin Liu; Frank B Hu; Rutai Hui
Journal:  Stroke       Date:  2011-10-27       Impact factor: 7.914

4.  Identification of novel long noncoding RNAs underlying vertebrate cardiovascular development.

Authors:  Leo Kurian; Aitor Aguirre; Ignacio Sancho-Martinez; Christopher Benner; Tomoaki Hishida; Thai B Nguyen; Pradeep Reddy; Emmanuel Nivet; Marie N Krause; David A Nelles; Concepcion Rodriguez Esteban; Josep M Campistol; Gene W Yeo; Juan Carlos Izpisua Belmonte
Journal:  Circulation       Date:  2015-03-04       Impact factor: 29.690

5.  Deletion of a nuclease-sensitive region between the Igf2 and H19 genes leads to Igf2 misregulation and increased adiposity.

Authors:  B K Jones; J Levorse; S M Tilghman
Journal:  Hum Mol Genet       Date:  2001-04-01       Impact factor: 6.150

6.  Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.

Authors:  Ewan Birney; John A Stamatoyannopoulos; Anindya Dutta; Roderic Guigó; Thomas R Gingeras; Elliott H Margulies; Zhiping Weng; Michael Snyder; Emmanouil T Dermitzakis; Robert E Thurman; Michael S Kuehn; Christopher M Taylor; Shane Neph; Christoph M Koch; Saurabh Asthana; Ankit Malhotra; Ivan Adzhubei; Jason A Greenbaum; Robert M Andrews; Paul Flicek; Patrick J Boyle; Hua Cao; Nigel P Carter; Gayle K Clelland; Sean Davis; Nathan Day; Pawandeep Dhami; Shane C Dillon; Michael O Dorschner; Heike Fiegler; Paul G Giresi; Jeff Goldy; Michael Hawrylycz; Andrew Haydock; Richard Humbert; Keith D James; Brett E Johnson; Ericka M Johnson; Tristan T Frum; Elizabeth R Rosenzweig; Neerja Karnani; Kirsten Lee; Gregory C Lefebvre; Patrick A Navas; Fidencio Neri; Stephen C J Parker; Peter J Sabo; Richard Sandstrom; Anthony Shafer; David Vetrie; Molly Weaver; Sarah Wilcox; Man Yu; Francis S Collins; Job Dekker; Jason D Lieb; Thomas D Tullius; Gregory E Crawford; Shamil Sunyaev; William S Noble; Ian Dunham; France Denoeud; Alexandre Reymond; Philipp Kapranov; Joel Rozowsky; Deyou Zheng; Robert Castelo; Adam Frankish; Jennifer Harrow; Srinka Ghosh; Albin Sandelin; Ivo L Hofacker; Robert Baertsch; Damian Keefe; Sujit Dike; Jill Cheng; Heather A Hirsch; Edward A Sekinger; Julien Lagarde; Josep F Abril; Atif Shahab; Christoph Flamm; Claudia Fried; Jörg Hackermüller; Jana Hertel; Manja Lindemeyer; Kristin Missal; Andrea Tanzer; Stefan Washietl; Jan Korbel; Olof Emanuelsson; Jakob S Pedersen; Nancy Holroyd; Ruth Taylor; David Swarbreck; Nicholas Matthews; Mark C Dickson; Daryl J Thomas; Matthew T Weirauch; James Gilbert; Jorg Drenkow; Ian Bell; XiaoDong Zhao; K G Srinivasan; Wing-Kin Sung; Hong Sain Ooi; Kuo Ping Chiu; Sylvain Foissac; Tyler Alioto; Michael Brent; Lior Pachter; Michael L Tress; Alfonso Valencia; Siew Woh Choo; Chiou Yu Choo; Catherine Ucla; Caroline Manzano; Carine Wyss; Evelyn Cheung; Taane G Clark; James B Brown; Madhavan Ganesh; Sandeep Patel; Hari Tammana; Jacqueline Chrast; Charlotte N Henrichsen; Chikatoshi Kai; Jun Kawai; Ugrappa Nagalakshmi; Jiaqian Wu; Zheng Lian; Jin Lian; Peter Newburger; Xueqing Zhang; Peter Bickel; John S Mattick; Piero Carninci; Yoshihide Hayashizaki; Sherman Weissman; Tim Hubbard; Richard M Myers; Jane Rogers; Peter F Stadler; Todd M Lowe; Chia-Lin Wei; Yijun Ruan; Kevin Struhl; Mark Gerstein; Stylianos E Antonarakis; Yutao Fu; Eric D Green; Ulaş Karaöz; Adam Siepel; James Taylor; Laura A Liefer; Kris A Wetterstrand; Peter J Good; Elise A Feingold; Mark S Guyer; Gregory M Cooper; George Asimenos; Colin N Dewey; Minmei Hou; Sergey Nikolaev; Juan I Montoya-Burgos; Ari Löytynoja; Simon Whelan; Fabio Pardi; Tim Massingham; Haiyan Huang; Nancy R Zhang; Ian Holmes; James C Mullikin; Abel Ureta-Vidal; Benedict Paten; Michael Seringhaus; Deanna Church; Kate Rosenbloom; W James Kent; Eric A Stone; Serafim Batzoglou; Nick Goldman; Ross C Hardison; David Haussler; Webb Miller; Arend Sidow; Nathan D Trinklein; Zhengdong D Zhang; Leah Barrera; Rhona Stuart; David C King; Adam Ameur; Stefan Enroth; Mark C Bieda; Jonghwan Kim; Akshay A Bhinge; Nan Jiang; Jun Liu; Fei Yao; Vinsensius B Vega; Charlie W H Lee; Patrick Ng; Atif Shahab; Annie Yang; Zarmik Moqtaderi; Zhou Zhu; Xiaoqin Xu; Sharon Squazzo; Matthew J Oberley; David Inman; Michael A Singer; Todd A Richmond; Kyle J Munn; Alvaro Rada-Iglesias; Ola Wallerman; Jan Komorowski; Joanna C Fowler; Phillippe Couttet; Alexander W Bruce; Oliver M Dovey; Peter D Ellis; Cordelia F Langford; David A Nix; Ghia Euskirchen; Stephen Hartman; Alexander E Urban; Peter Kraus; Sara Van Calcar; Nate Heintzman; Tae Hoon Kim; Kun Wang; Chunxu Qu; Gary Hon; Rosa Luna; Christopher K Glass; M Geoff Rosenfeld; Shelley Force Aldred; Sara J Cooper; Anason Halees; Jane M Lin; Hennady P Shulha; Xiaoling Zhang; Mousheng Xu; Jaafar N S Haidar; Yong Yu; Yijun Ruan; Vishwanath R Iyer; Roland D Green; Claes Wadelius; Peggy J Farnham; Bing Ren; Rachel A Harte; Angie S Hinrichs; Heather Trumbower; Hiram Clawson; Jennifer Hillman-Jackson; Ann S Zweig; Kayla Smith; Archana Thakkapallayil; Galt Barber; Robert M Kuhn; Donna Karolchik; Lluis Armengol; Christine P Bird; Paul I W de Bakker; Andrew D Kern; Nuria Lopez-Bigas; Joel D Martin; Barbara E Stranger; Abigail Woodroffe; Eugene Davydov; Antigone Dimas; Eduardo Eyras; Ingileif B Hallgrímsdóttir; Julian Huppert; Michael C Zody; Gonçalo R Abecasis; Xavier Estivill; Gerard G Bouffard; Xiaobin Guan; Nancy F Hansen; Jacquelyn R Idol; Valerie V B Maduro; Baishali Maskeri; Jennifer C McDowell; Morgan Park; Pamela J Thomas; Alice C Young; Robert W Blakesley; Donna M Muzny; Erica Sodergren; David A Wheeler; Kim C Worley; Huaiyang Jiang; George M Weinstock; Richard A Gibbs; Tina Graves; Robert Fulton; Elaine R Mardis; Richard K Wilson; Michele Clamp; James Cuff; Sante Gnerre; David B Jaffe; Jean L Chang; Kerstin Lindblad-Toh; Eric S Lander; Maxim Koriabine; Mikhail Nefedov; Kazutoyo Osoegawa; Yuko Yoshinaga; Baoli Zhu; Pieter J de Jong
Journal:  Nature       Date:  2007-06-14       Impact factor: 49.962

7.  A noncoding antisense RNA in tie-1 locus regulates tie-1 function in vivo.

Authors:  Keguo Li; Yannick Blum; Anjali Verma; Zhong Liu; Kallal Pramanik; Noah R Leigh; Chang Z Chun; Ganesh V Samant; Baofeng Zhao; Maija K Garnaas; Mark A Horswill; Stephen A Stanhope; Paula E North; Robert Q Miao; George A Wilkinson; Markus Affolter; Ramani Ramchandran
Journal:  Blood       Date:  2009-10-30       Impact factor: 22.113

8.  βlinc1 encodes a long noncoding RNA that regulates islet β-cell formation and function.

Authors:  Luis Arnes; Ildem Akerman; Dina A Balderes; Jorge Ferrer; Lori Sussel
Journal:  Genes Dev       Date:  2016-03-01       Impact factor: 11.361

9.  Meta-signature LncRNAs serve as novel biomarkers for colorectal cancer: integrated bioinformatics analysis, experimental validation and diagnostic evaluation.

Authors:  Meiyu Dai; Xiaoli Chen; Shanying Mo; Jinwan Li; Zhizhuo Huang; Shifeng Huang; Junyi Xu; Baoyu He; Yan Zou; Jingfan Chen; Shengming Dai
Journal:  Sci Rep       Date:  2017-04-13       Impact factor: 4.379

10.  Human Pancreatic β Cell lncRNAs Control Cell-Specific Regulatory Networks.

Authors:  Ildem Akerman; Zhidong Tu; Anthony Beucher; Delphine M Y Rolando; Claire Sauty-Colace; Marion Benazra; Nikolina Nakic; Jialiang Yang; Huan Wang; Lorenzo Pasquali; Ignasi Moran; Javier Garcia-Hurtado; Natalia Castro; Roser Gonzalez-Franco; Andrew F Stewart; Caroline Bonner; Lorenzo Piemonti; Thierry Berney; Leif Groop; Julie Kerr-Conte; Francois Pattou; Carmen Argmann; Eric Schadt; Philippe Ravassard; Jorge Ferrer
Journal:  Cell Metab       Date:  2016-12-29       Impact factor: 27.287

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  27 in total

Review 1.  Epigenetic Mechanisms in Monocytes/Macrophages Regulate Inflammation in Cardiometabolic and Vascular Disease.

Authors:  Frank M Davis; Katherine A Gallagher
Journal:  Arterioscler Thromb Vasc Biol       Date:  2019-04       Impact factor: 8.311

2.  LncRNA SNHG1 regulates vascular endothelial cell proliferation and angiogenesis via miR-196a.

Authors:  Liping Zhang; Qiang Zhang; Lingxia Lv; Zhu Jianhua; Chen Ting; Yutao Wu
Journal:  J Mol Histol       Date:  2020-04-15       Impact factor: 2.611

3.  TPTEP1 suppresses high glucose-induced dysfunction in retinal vascular endothelial cells by interacting with STAT3 and targeting VEGFA.

Authors:  Xiaoping Sun; Yuebing Lu; Tao Lei
Journal:  Acta Diabetol       Date:  2021-02-12       Impact factor: 4.280

Review 4.  Decoding microRNA drivers in atherosclerosis.

Authors:  Tanwi Vartak; Soundharya Kumaresan; Eoin Brennan
Journal:  Biosci Rep       Date:  2022-07-29       Impact factor: 3.976

5.  Where in the (lncRNA) World Is CARMN?: Safeguarding Against Vascular Dysfunction.

Authors:  Dan Wang; Tamer Sallam
Journal:  Circ Res       Date:  2021-04-29       Impact factor: 17.367

6.  Construction of a ceRNA immunoregulatory network related to the development of vascular dementia through a weighted gene coexpression network analysis.

Authors:  Hongshuo Shi; Fengshan Sun; Tiantian Yang; Min Peng; Min Wang; Yiwen Zhang; Yao Wang; Chengda Dong; Zhaojun Yan; Guomin Si; Wenbo Wang; Yujie Li
Journal:  Ann Transl Med       Date:  2021-05

7.  LncRNA AK020546 protects against cardiac ischemia-reperfusion injury by sponging miR-350-3p.

Authors:  Meiqi Zhang; Kang Cheng; Huan Chen; Jianfeng Tu; Ye Shen; Lingxiao Pang; Weihua Wu; Zhenfei Yu
Journal:  Aging (Albany NY)       Date:  2021-05-13       Impact factor: 5.682

Review 8.  Medial Arterial Calcification: JACC State-of-the-Art Review.

Authors:  Peter Lanzer; Fadil M Hannan; Jan D Lanzer; Jan Janzen; Paolo Raggi; Dominic Furniss; Mirjam Schuchardt; Rajesh Thakker; Pak-Wing Fok; Julio Saez-Rodriguez; Angel Millan; Yu Sato; Roberto Ferraresi; Renu Virmani; Cynthia St Hilaire
Journal:  J Am Coll Cardiol       Date:  2021-09-14       Impact factor: 27.203

Review 9.  [Research advance of ANRIL on atherosclerosis by regulating cell proliferation and apoptosis].

Authors:  Juan Fang; Zhicheng Pan; Xiaogang Guo
Journal:  Zhejiang Da Xue Xue Bao Yi Xue Ban       Date:  2020-05-25

Review 10.  Targeting senescent cells to attenuate cardiovascular disease progression.

Authors:  Ping Song; Qiang Zhao; Ming-Hui Zou
Journal:  Ageing Res Rev       Date:  2020-04-13       Impact factor: 10.895

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