Literature DB >> 30384638

Inference of time-varying networks through transfer entropy, the case of a Boolean network model.

Maurizio Porfiri1, Manuel Ruiz Marín2.   

Abstract

Inferring network topologies from the time series of individual units is of paramount importance in the study of biological and social networks. Despite considerable progress, our success in network inference is largely limited to static networks and autonomous node dynamics, which are often inadequate to describe complex systems. Here, we explore the possibility of reconstructing time-varying weighted topologies through the information-theoretic notion of transfer entropy. We focus on a Boolean network model in which the weight of the links and the spontaneous activity periodically vary in time. For slowly-varying dynamics, we establish closed-form expressions for the stationary periodic distribution and transfer entropy between each pair of nodes. Our results indicate that the instantaneous weight of each link is mapped into a corresponding transfer entropy value, thereby affording the possibility of pinpointing the dominant weights at each time. However, comparing transfer entropy readings at different times may provide erroneous estimates of the strength of the links in time, due to a counterintuitive modulation of the information flow by the non-autonomous dynamics. In fact, this time variation should be used to scale transfer entropy values toward the correct inference of the time evolution of the network weights. This study constitutes a necessary step toward a mathematically-principled use of transfer entropy to reconstruct time-varying networks.

Year:  2018        PMID: 30384638     DOI: 10.1063/1.5047429

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  1 in total

1.  Behavioural and life-history responses of mosquitofish to biologically inspired and interactive robotic predators.

Authors:  Giovanni Polverino; Mert Karakaya; Chiara Spinello; Vrishin R Soman; Maurizio Porfiri
Journal:  J R Soc Interface       Date:  2019-09-11       Impact factor: 4.118

  1 in total

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