Literature DB >> 3037321

Ingi, a 5.2-kb dispersed sequence element from Trypanosoma brucei that carries half of a smaller mobile element at either end and has homology with mammalian LINEs.

B E Kimmel, O K ole-MoiYoi, J R Young.   

Abstract

A dispersed repetitive element named ingi, which is present in the genome of the protozoan parasite Trypanosoma brucei, is described. One complete 5.2-kilobase element and the ends of two others were sequenced. There were no direct or inverted terminal repeats. Rather, the ends consisted of two halves of a previously described 512-base-pair transposable element (G. Hasan, M.J. Turner, and J.S. Cordingley, Cell 37:333-341, 1984). Oligo(dA) tails and possible insertion site duplications suggested that ingi is a retroposon. The sequenced element appears to be a pseudogene copy of an original retroposon with one or more open reading frames occupying most of its length. Significant homologies of the encoded amino acid sequences with reverse transcriptases and mammalian long interpersed nuclear element sequences suggest a remote evolutionary origin for this kind of retroposon.

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Year:  1987        PMID: 3037321      PMCID: PMC365235          DOI: 10.1128/mcb.7.4.1465-1475.1987

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  50 in total

1.  The sequence of a large L1Md element reveals a tandemly repeated 5' end and several features found in retrotransposons.

Authors:  D D Loeb; R W Padgett; S C Hardies; W R Shehee; M B Comer; M H Edgell; C A Hutchison
Journal:  Mol Cell Biol       Date:  1986-01       Impact factor: 4.272

2.  Retrovirus-like particles containing RNA homologous to the transposable element copia in Drosophila melanogaster.

Authors:  T Shiba; K Saigo
Journal:  Nature       Date:  1983-03-10       Impact factor: 49.962

3.  Characterization of satellite DNA in Trypanosoma brucei and Trypanosoma cruzi.

Authors:  P Sloof; J L Bos; A F Konings; H H Menke; P Borst; W E Gutteridge; W Leon
Journal:  J Mol Biol       Date:  1983-06-15       Impact factor: 5.469

4.  Tandem repetition of the 5' mini-exon of variant surface glycoprotein genes: a multiple promoter for VSG gene transcription?

Authors:  T De Lange; A Y Liu; L H Van der Ploeg; P Borst; M C Tromp; J H Van Boom
Journal:  Cell       Date:  1983-10       Impact factor: 41.582

5.  Relationship between multiple copies of a T. brucei variable surface glycoprotein gene whose expression is not controlled by duplication.

Authors:  J R Young; J S Shah; G Matthyssens; R O Williams
Journal:  Cell       Date:  1983-04       Impact factor: 41.582

6.  Structures of P transposable elements and their sites of insertion and excision in the Drosophila melanogaster genome.

Authors:  K O'Hare; G M Rubin
Journal:  Cell       Date:  1983-08       Impact factor: 41.582

7.  The transposition unit of variant surface glycoprotein gene 118 of Trypanosoma brucei. Presence of repeated elements at its border and absence of promoter-associated sequences.

Authors:  A Y Liu; L H Van der Ploeg; F A Rijsewijk; P Borst
Journal:  J Mol Biol       Date:  1983-06-15       Impact factor: 5.469

8.  A family of oligo-adenylate-terminated transposable sequences in Drosophila melanogaster.

Authors:  P P Di Nocera; M E Digan; I B Dawid
Journal:  J Mol Biol       Date:  1983-08-25       Impact factor: 5.469

9.  Sequences homologous to the variant antigen mRNA spliced leader are located in tandem repeats and variable orphons in trypanosoma brucei.

Authors:  R G Nelson; M Parsons; P J Barr; K Stuart; M Selkirk; N Agabian
Journal:  Cell       Date:  1983-10       Impact factor: 41.582

10.  Human adult T-cell leukemia virus: complete nucleotide sequence of the provirus genome integrated in leukemia cell DNA.

Authors:  M Seiki; S Hattori; Y Hirayama; M Yoshida
Journal:  Proc Natl Acad Sci U S A       Date:  1983-06       Impact factor: 11.205

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  76 in total

1.  RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26-nucleotide RNAs.

Authors:  A Djikeng; H Shi; C Tschudi; E Ullu
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

2.  Analysis of a donor gene region for a variant surface glycoprotein and its expression site in African trypanosomes.

Authors:  D J LaCount; N M El-Sayed; S Kaul; D Wanless; C M Turner; J E Donelson
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

3.  Argonaute protein in the early divergent eukaryote Trypanosoma brucei: control of small interfering RNA accumulation and retroposon transcript abundance.

Authors:  Huafang Shi; Appolinaire Djikeng; Christian Tschudi; Elisabetta Ullu
Journal:  Mol Cell Biol       Date:  2004-01       Impact factor: 4.272

Review 4.  Mobile genetic elements in protozoan parasites.

Authors:  Sudha Bhattacharya; Abhijeet Bakre; Alok Bhattacharya
Journal:  J Genet       Date:  2002-08       Impact factor: 1.166

5.  A redefinition of the Asp-Asp domain of reverse transcriptases.

Authors:  A M Velasco; L Medrano; A Lazcano; J Oró
Journal:  J Mol Evol       Date:  1992-12       Impact factor: 2.395

Review 6.  Repetitive elements in genomes of parasitic protozoa.

Authors:  Bill Wickstead; Klaus Ersfeld; Keith Gull
Journal:  Microbiol Mol Biol Rev       Date:  2003-09       Impact factor: 11.056

7.  Identification of an internal cis-element essential for the human L1 transcription and a nuclear factor(s) binding to the element.

Authors:  R Minakami; K Kurose; K Etoh; Y Furuhata; M Hattori; Y Sakaki
Journal:  Nucleic Acids Res       Date:  1992-06-25       Impact factor: 16.971

8.  A long interspersed repetitive element--the I factor of Drosophila teissieri--is able to transpose in different Drosophila species.

Authors:  P Abad; C Vaury; A Pélisson; M C Chaboissier; I Busseau; A Bucheton
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

9.  The beta heterochromatic sequences flanking the I elements are themselves defective transposable elements.

Authors:  C Vaury; A Bucheton; A Pelisson
Journal:  Chromosoma       Date:  1989-09       Impact factor: 4.316

10.  An abundant LINE-like element amplified in the genome of Lilium speciosum.

Authors:  P R Leeton; D R Smyth
Journal:  Mol Gen Genet       Date:  1993-02
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