Literature DB >> 30368171

Multidimensional and fuzzy sample entropy (SampEnMF) for quantifying H&E histological images of colorectal cancer.

Luiz Fernando Segato Dos Santos1, Leandro Alves Neves2, Guilherme Botazzo Rozendo3, Matheus Gonçalves Ribeiro4, Marcelo Zanchetta do Nascimento5, Thaína Aparecida Azevedo Tosta6.   

Abstract

In this study, we propose to use a method based on the combination of sample entropy with multiscale and multidimensional approaches, along with a fuzzy function. The model was applied to quantify and classify H&E histological images of colorectal cancer. The multiscale approach was defined by analysing windows of different sizes and variations in tolerance for determining pattern similarity. The multidimensional strategy was performed by considering each pixel in the colour image as an n-dimensional vector, which was analysed from the Minkowski distance. The fuzzy strategy was a Gaussian function used to verify the pertinence of the distances between windows. The result was a method capable of computing similarities between pixels contained in windows of various sizes, as well as the information present in the colour channels. The power of quantification was tested in a public colorectal image dataset, which was composed of both benign and malignant classes. The results were given as inputs for classifiers of different categories and analysed by applying the k-fold cross-validation and holdout methods. The derived performances indicate that the proposed association was capable of distinguishing the benign and malignant groups, with values that surpassed those results obtained with important techniques available in the Literature. The best performance was an AUC value of 0.983, an important result, mainly when we consider the difficulties of clinical practice for the diagnosis of the colorectal cancer.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Colorectal cancer; Fuzzy approach; H&E images; Multidimensional approach; Sample entropy

Mesh:

Year:  2018        PMID: 30368171     DOI: 10.1016/j.compbiomed.2018.10.013

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  5 in total

1.  Colored Texture Analysis Fuzzy Entropy Methods with a Dermoscopic Application.

Authors:  Mirvana Hilal; Andreia S Gaudêncio; Pedro G Vaz; João Cardoso; Anne Humeau-Heurtier
Journal:  Entropy (Basel)       Date:  2022-06-15       Impact factor: 2.738

2.  Comparison of texture-based classification and deep learning for plantar soft tissue histology segmentation.

Authors:  Lynda Brady; Yak-Nam Wang; Eric Rombokas; William R Ledoux
Journal:  Comput Biol Med       Date:  2021-05-15       Impact factor: 6.698

3.  On Structural Entropy and Spatial Filling Factor Analysis of Colonoscopy Pictures.

Authors:  Szilvia Nagy; Brigita Sziová; János Pipek
Journal:  Entropy (Basel)       Date:  2019-03-06       Impact factor: 2.524

4.  EntropyHub: An open-source toolkit for entropic time series analysis.

Authors:  Matthew W Flood; Bernd Grimm
Journal:  PLoS One       Date:  2021-11-04       Impact factor: 3.240

5.  Developing a clinical decision support system based on the fuzzy logic and decision tree to predict colorectal cancer.

Authors:  Raoof Nopour; Mostafa Shanbehzadeh; Hadi Kazemi-Arpanahi
Journal:  Med J Islam Repub Iran       Date:  2021-04-03
  5 in total

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