| Literature DB >> 30362555 |
Zhiyun He1, Jie Dang2, Ailin Song3, Xiang Cui1, Zhijun Ma1, Zhongtao Zhang4.
Abstract
This study aimed to identify potential biomarkers and the therapeutic targets for colorectal adenocarcinoma by systematically evaluate a large scale of long noncoding RNAs (lncRNAs) expression data from TCGA. The algorithm t-distributed stochastic neighbor embedding and hierarchical clustering were utilized to group the samples into three clusters that showed a different prognosis. To identify the relationship between the clustered groups and different histoclinical features, different statistical methods were used. The functions of LINC01234 and MIR210HG were investigated with the help of the public database. The results showed that the expression levels of lncRNAs were able to distinguish the tumor samples from the normal tissues and in further they were able to predict the prognosis of the patients. We proposed two potential lncRNAs, which might serve as a biomarker or therapeutic targets. LINC01234 can be a good biomarker. In contrast, MIR210HG participated in the progression of colorectal adenocarcinoma by regulating hypoxia. It might function through an lncRNA-microRNA-messenger RNA regulatory network with MIR210 and RASSF7.Entities:
Keywords: LINC01234; MIR210HG; colorectal adenocarcinoma; long noncoding RNAs (lncRNAs); survival analysis
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Year: 2018 PMID: 30362555 DOI: 10.1002/jcp.27424
Source DB: PubMed Journal: J Cell Physiol ISSN: 0021-9541 Impact factor: 6.384