Literature DB >> 30359636

Quantitative evaluation of TP53 immunohistochemistry to predict gene mutations: lessons learnt from a series of colorectal carcinomas.

Friedrich Prall1, Maja Hühns2.   

Abstract

This study addressed if TP53 immunohistochemistry as a surrogate method for gene sequencing could be applied to colorectal carcinomas as successfully as recently reported for ovarian cancers. Sanger sequencing of the coding exons 2-11 of 87 tumors yielded a total of 65 mutations in 61 of the tumors. Immunohistochemistry was done with the Do-7 antibody. By a pattern recognition evaluation of immunohistochemistry, 44 cases were classified as "overexpressors" and 20 as having "wild-type" immunostaining; complete absence of or cytoplasmic immunostaining was seen in 9 and 4 cases, respectively. However, for 10 tumors, a confident distinction between overexpression and wild-type immunostaining was not possible ("indeterminates"). Quantitative analysis on digital images (i) using QuPath to determine the percentage of immunopositive cells and (ii) WEKA segmentation to obtain an index that quantified the intensities of tumor cells' nuclear immunostaining showed a continuous distribution of the data, explaining failure of assessment by pattern recognition in some cases. Quantitative data were then used to define cutoffs by receiver operator curve analysis, which allowed for predicting the mutational status of the TP53 gene with sensitivities of 0.89 and 0.95 for the 2 methods, respectively, and specificities of 0.81 for both. In conclusion, by a dedicated approach, TP53 immunohistochemistry works well as a surrogate method for molecular studies. Considering the potential predictive role of TP53 gene mutations in chemotherapy decisions, TP53 immunohistochemistry may be of value alongside with molecular gene studies, possibly even across different cancers.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Colorectal cancer; Immunohistochemistry; QuPath evaluation; TP53 gene mutation; WEKA segmentation

Mesh:

Substances:

Year:  2018        PMID: 30359636     DOI: 10.1016/j.humpath.2018.10.012

Source DB:  PubMed          Journal:  Hum Pathol        ISSN: 0046-8177            Impact factor:   3.466


  4 in total

1.  Immunohistochemistry scoring of breast tumor tissue microarrays: A comparison study across three software applications.

Authors:  Gabrielle M Baker; Vanessa C Bret-Mounet; Tengteng Wang; Mitko Veta; Hanqiao Zheng; Laura C Collins; A Heather Eliassen; Rulla M Tamimi; Yujing J Heng
Journal:  J Pathol Inform       Date:  2022-06-28

2.  EWI2 promotes endolysosome-mediated turnover of growth factor receptors and integrins to suppress lung cancer.

Authors:  Jie Wang; Jonathan D Wren; Yingjun Ding; Junxiong Chen; Nikhil Mittal; Chao Xu; Xing Li; Cengxi Zeng; Meng Wang; Jing Shi; Yanhui H Zhang; Sangyoon J Han; Xin A Zhang
Journal:  Cancer Lett       Date:  2022-03-24       Impact factor: 9.756

3.  NTRK fusion in Japanese colorectal adenocarcinomas.

Authors:  Yuya Yamashiro; Taisei Kurihara; Takuo Hayashi; Yoshiyuki Suehara; Takashi Yao; Shunsuke Kato; Tsuyoshi Saito
Journal:  Sci Rep       Date:  2021-03-11       Impact factor: 4.379

4.  The prognostic significance of p63 cytoplasmic expression in colorectal cancer. An immunohistochemical study.

Authors:  Abdulkader M Albasri; Mohammed A Elkablawy; Irfan A Ansari; Ahmed S Alhujaily; Amal A Khalil
Journal:  Saudi Med J       Date:  2019-05       Impact factor: 1.484

  4 in total

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