Literature DB >> 30353533

Functional Studies of Transcriptional Cofactors via Microinjection-Mediated Gene Editing in Xenopus.

Yuki Shibata1, Lingyu Bao1,2, Liezhen Fu1, Bingyin Shi2, Yun-Bo Shi3.   

Abstract

The anuran Xenopus laevis has been studied for decades as a model for vertebrate cell and developmental biology. More recently, the highly related species Xenopus tropicalis has offered the opportunity to carry out genetic studies due to its diploid genome as compared to the pseudo-tetraploid Xenopus laevis. Amphibians undergo a biphasic development: embryogenesis to produce a free-living tadpoles and subsequent metamorphosis to transform the tadpole to a frog. This second phase mimics the so-called postembryonic development in mammals when many organs/tissues mature into their adult form in the presence of high levels of plasma thyroid hormone (T3). The total dependence of amphibian metamorphosis on T3 offers a unique opportunity to study postembryonic development in vertebrates, especially with the recent development gene editing technologies that function in amphibians. Here, we first review the basic molecular understanding of the regulation of Xenopus metamorphosis by T3 and T3 receptors (TRs), and then describe a detailed method to use CRISPR to knock out the TR-coactivator SRC3 (steroid receptor coactivator 3), a histone acetyltransferase, in order to study its involvement in gene regulation by T3 in vivo and Xenopus development.

Entities:  

Keywords:  CRISPR; Coactivator; Histone acetyltransferase; Histone modification; Metamorphosis; Postembryonic development; Thyroid hormone receptor; Xenopus laevis; Xenopus tropicalis

Mesh:

Substances:

Year:  2019        PMID: 30353533      PMCID: PMC7291954          DOI: 10.1007/978-1-4939-8831-0_29

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  71 in total

Review 1.  The coregulator exchange in transcriptional functions of nuclear receptors.

Authors:  C K Glass; M G Rosenfeld
Journal:  Genes Dev       Date:  2000-01-15       Impact factor: 11.361

Review 2.  N-CoR-HDAC corepressor complexes: roles in transcriptional regulation by nuclear hormone receptors.

Authors:  P L Jones; Y B Shi
Journal:  Curr Top Microbiol Immunol       Date:  2003       Impact factor: 4.291

3.  Histone methyltransferase Dot1L plays a role in postembryonic development in Xenopus tropicalis.

Authors:  Luan Wen; Liezhen Fu; Xiaogang Guo; Yonglong Chen; Yun-Bo Shi
Journal:  FASEB J       Date:  2014-11-03       Impact factor: 5.191

4.  A correlation of thyroid hormone receptor gene expression with amphibian metamorphosis.

Authors:  Y Yaoita; D D Brown
Journal:  Genes Dev       Date:  1990-11       Impact factor: 11.361

5.  A role of unliganded thyroid hormone receptor in postembryonic development in Xenopus laevis.

Authors:  Yukiyasu Sato; Daniel R Buchholz; Bindu D Paul; Yun-Bo Shi
Journal:  Mech Dev       Date:  2007-07       Impact factor: 1.882

6.  Metamorphic T3-response genes have specific co-regulator requirements.

Authors:  Emmanuelle Havis; Laurent M Sachs; Barbara A Demeneix
Journal:  EMBO Rep       Date:  2003-08-15       Impact factor: 8.807

7.  Specific histone lysine 4 methylation patterns define TR-binding capacity and differentiate direct T3 responses.

Authors:  Patrice Bilesimo; Pascale Jolivet; Gladys Alfama; Nicolas Buisine; Sebastien Le Mevel; Emmanuelle Havis; Barbara A Demeneix; Laurent M Sachs
Journal:  Mol Endocrinol       Date:  2011-01-14

8.  Regulation of transcription by a protein methyltransferase.

Authors:  D Chen; H Ma; H Hong; S S Koh; S M Huang; B T Schurter; D W Aswad; M R Stallcup
Journal:  Science       Date:  1999-06-25       Impact factor: 47.728

9.  Multiple thyroid hormone-induced muscle growth and death programs during metamorphosis in Xenopus laevis.

Authors:  Biswajit Das; Alexander M Schreiber; Haochu Huang; Donald D Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-04       Impact factor: 11.205

10.  Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing.

Authors:  Shengdar Q Tsai; Nicolas Wyvekens; Cyd Khayter; Jennifer A Foden; Vishal Thapar; Deepak Reyon; Mathew J Goodwin; Martin J Aryee; J Keith Joung
Journal:  Nat Biotechnol       Date:  2014-04-25       Impact factor: 54.908

View more
  4 in total

1.  Organ-Specific Requirements for Thyroid Hormone Receptor Ensure Temporal Coordination of Tissue-Specific Transformations and Completion of Xenopus Metamorphosis.

Authors:  Yuki Shibata; Luan Wen; Morihiro Okada; Yun-Bo Shi
Journal:  Thyroid       Date:  2020-01-23       Impact factor: 6.568

2.  Knocking out histone methyltransferase PRMT1 leads to stalled tadpole development and lethality in Xenopus tropicalis.

Authors:  Yuki Shibata; Morihiro Okada; Thomas C Miller; Yun-Bo Shi
Journal:  Biochim Biophys Acta Gen Subj       Date:  2019-11-15       Impact factor: 3.770

3.  Thyroid hormone receptor α controls larval intestinal epithelial cell death by regulating the CDK1 pathway.

Authors:  Yuta Tanizaki; Hongen Zhang; Yuki Shibata; Yun-Bo Shi
Journal:  Commun Biol       Date:  2022-02-07

4.  Thyroid hormone receptor beta is critical for intestinal remodeling during Xenopus tropicalis metamorphosis.

Authors:  Yuki Shibata; Yuta Tanizaki; Yun-Bo Shi
Journal:  Cell Biosci       Date:  2020-03-27       Impact factor: 7.133

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.