| Literature DB >> 30349486 |
Shimeng Li1, Lu Qiao1, Zhaowei Yang1, Chengyan He1.
Abstract
Background: Nicotinamide N-methyltransferase (NNMT) is an enzyme that catalyzes N-methylation of pyridine-containing compounds. NNMT is upregulated in many types of solid tumors, suggesting the potential for its use as a tumor biomarker. However, the prognostic value of NNMT in solid tumors is still unclear. We therefore conducted a meta-analysis to investigate the association between NNMT expression and survival in patients with solid tumors.Entities:
Keywords: meta-analysis; nicotinamide N-methyltransferase (NNMT); poor outcome; prognosis biomarker; solid tumor
Year: 2018 PMID: 30349486 PMCID: PMC6187113 DOI: 10.3389/fphys.2018.01407
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
Figure 1Flow diagram for selection of studies.
Characteristics of included studies.
| Jung et al., | Glioblastoma | TCGA | 525 | 264/261 | NR | Microarray | Tumor | OS | 6 |
| Jung et al., | Glioblastoma | TCGA | 667 | 334/333 | NR | RNA-seq | Tumor | OS | 6 |
| Jung et al., | Glioblastoma | TCGA | 397 | 194/203 | NR | Microarray | Tumor | OS | 6 |
| Jung et al., | Glioblastoma | TCGA | 77 | 38/39 | NR | Microarray | Tumor | OS | 6 |
| Jung et al., | Glioblastoma | TCGA | 270 | 133/137 | NR | Microarray | Tumor | OS | 6 |
| Jung et al., | Glioblastoma | TCGA | 50 | 25/25 | NR | Microarray | Tumor | OS | 6 |
| Chen et al., | Gastric Cancer | China | 617 | 341/276 | NR | IHC | Tumor | OS | 8 |
| Xu et al., | Pancreatic Cancer | China | 178 | 99/79 | NR | IHC | Tumor | OS | 9 |
| Zhou et al., | Prostate Cancer | China | 81 | 50/31 | 52(7–96) | IHC | Tumor | PFS, OS | 8 |
| Bi et al., | Pancreatic Cancer | America | 22 | 14/8 | NR | qPCR | Tumor | OS | 7 |
| Win et al., | Nasopharyngeal Cancer | Taiwan China, | 124 | 62/62 | 71(1–141) | IHC | Tumor | DSS, MeFS | 8 |
| Ujiie et al., | Lung Cancer | Japan | 109 | 27/82 | NR | ELISA | Serum | OS | 7 |
| Kim et al., | Hepatocellular Cancer | Korea | 120 | 48/72 | 50(3–92) | qPCR | Tumor | OS, DFS | 8 |
| Yao et al., | Renal Cancer | Japan | 103 | 35/68 | 71.0(1.9–188.6) | qPCR | Tumor | CSS | 9 |
NR, not reported; IHC, immunohistochemistry; qPCR, quantitative polymerase chain reaction; ELISA, enzyme linked immunosorbent assay; TCGA, The Cancer Genome Atlas; NOS, Newcastle-Ottawa Scale; OS, overall survival; DSS, disease-specific survival; CSS, cancer-specific survival; PFS, progression-free survival; DFS, disease-free survival; MeFS, metastasis-free survival.
Cutoff value of high nicotinamide N-methyltransferase expression in eligible studies.
| Jung et al., | Glioblastoma | mRNA | High: Z-score > 0. |
| Jung et al., | Glioblastoma | mRNA | |
| Jung et al., | Glioblastoma | mRNA | |
| Jung et al., | Glioblastoma | mRNA | |
| Jung et al., | Glioblastoma | mRNA | |
| Jung et al., | Glioblastoma | mRNA | |
| Bi et al., | Pancreatic Cancer | mRNA | High: mRNA levels > mean expression level. |
| Kim et al., | Hepatocellular Cancer | mRNA | High: mRNA levels ≥ 4.40 (copy number ratio). |
| Yao et al., | Clear-cell Renal Cancer | mRNA | High: mRNA levels > mean expression level. |
| Chen et al., | Gastric Cancer | Protein | High: H-score > 120. |
| Xu et al., | Pancreatic Cancer | Protein | High: H-score ≥ 110. |
| Zhou et al., | Prostate Cancer | Protein | Immunoreactivity (IR) score > 4. |
| Win et al., | Nasopharyngeal Cancer | Protein | High: H score > median. |
| Ujiie et al., | Lung Cancer | Protein | High: > median NNMT value (710 pg/ml). |
GSEA, Gene Set Enrichment Analysis.
Figure 2Meta-analysis (forest plot) of NNMT evaluation studies included in (A) OS, (B) DSS, and (C) TTP.
Subgroup analyses of the association between nicotinamide N-methyltransferase upregulation and overall survival for patients with solid tumor.
| glioblastoma | 6 | 2.00 | (1.38–2.90) | 93.6 |
| Asian | 5 | 1.36 | (0.68–2.72) | 87.9 |
| Non-Asian | 7 | 1.89 | (1.31–2.73) | 92.6 |
| HR and 95% CI | 4 | 1.23 | (0.58–2.63) | 90.8 |
| Kaplan-Meier curves | 8 | 1.92 | (1.35–2.74) | 91.4 |
| mRNA-testing | 8 | 1.89 | (1.35–2.67) | 91.4 |
| protein-testing | 4 | 1.25 | (0.53–2.94) | 90.8 |
| ≥200 | 5 | 1.94 | (1.30–2.90) | 95 |
| <200 | 7 | 1.37 | (0.77–2.45) | 82.9 |
Figure 3Forrest plot of the subgroup analysis for the effect of NNMT upregulation on OS in (A) patients with glioblastoma, (B) patients with glioblastoma (excluding TCGA GBM dataset).
Figure 4Sensitivity analysis for NNMT upregulation on OS in (A) patients with solid tumor, (B) subgroup of glioblastoma, (C) mRNA-testing group.
Figure 5Funnel plots of included studies in the analysis of NNMT expression and the prognosis for solid tumors.