| Literature DB >> 30349345 |
Bryce C Simes1, Joshua P Moore1, Terry C Brown1, Tyler J Rushforth1, Angela L Bookout2, Chante L Richardson1.
Abstract
BACKGROUND: Hyperhidrosis affects 220 million people worldwide. The hallmark of this condition is excessive sweating, which negatively impacts the social, emotional, and occupational lives of these individuals. A familial predisposition has been established; however, the specific genes involved have yet to be identified.Entities:
Keywords: -116A variant; BCHE; CHRNA7; K-variant; acetylcholinesterase; butyrylcholinesterase; cholinergic receptor nicotinic alpha-7 subunit; hyperhidrosis; rs1126680; rs1803274
Year: 2018 PMID: 30349345 PMCID: PMC6187922 DOI: 10.2147/CCID.S176842
Source DB: PubMed Journal: Clin Cosmet Investig Dermatol ISSN: 1178-7015
Figure 1Idiogram of Chromosome 3 – BCHE gene on 3q26.1.
Abbreviation: BCHE, Butyrylcholinesterase.
Figure 2BCHE K-variant – The alanine nucleotide is replaced by a threonine nucleotide at the 539 codon.
Abbreviation: BCHE, Butyrylcholinesterase.
Figure 3SNP visualization via clustered heatmap.
Notes: The box for each SNP position indicates whether the sample has the most common variation (gray) or any other variation (black).
Abbreviation: SNP, single-nucleotide polymorphism.
Figure 4Allelic distribution sorted by SNP (including seven cases without a diagnosis of primary hyperhidrosis).
Note: The bar charts indicate overall counts of all variations broken down separately for case and control populations.
Abbreviation: SNP, single-nucleotide polymorphism.
Figure 5Allelic distribution sorted by SNP (excluding seven cases without a diagnosis of primary hyperhidrosis).
Note: The bar charts indicate overall counts of all variations broken down separately for case and control populations.
Abbreviation: SNP, single-nucleotide polymorphism.
Association of SNPs in the BCHE and CHRNA7 genes with hyperhidrosis
| Gene | SNP | Position | HWE | |||||
|---|---|---|---|---|---|---|---|---|
| MAF | Unadjusted | FDR Adjusted | Unadjusted | FDR Adjusted | ||||
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| rs1126680 | 165,837,337 | 1 | 0.02(0.05)[0] | 0.15 | 1 | 0.49 | 1 | |
| rs114706984 | 165,830,399 | 1 | 0.01(0)[0.02] | 1 | 1 | 1 | 1 | |
| rs121918556 | 165,786,255 | ND | 0(0)[0] | ND | 1 | ND | 1 | |
| rs121918557 | 165,829,962 | ND | 0(0)[0] | ND | 1 | ND | 1 | |
| rs121918558 | 165,830,567 | ND | 0(0)[0] | ND | 1 | ND | 1 | |
| rs1355534 | 165,788,069 | 1 | 0.27(0.29)[0.26] | 0.67 | 1 | 1 | 1 | |
| rs1355538 | 165,787,389 | 0.74 | 0.5(0.5)[0.5] | 0.81 | 1 | 0.84 | 1 | |
| rs1799807 | 165,830,741 | ND | 0(0)[0] | ND | 1 | ND | 1 | |
| rs1803274 | 165,773,492 | 0.44 | 0.13(0.14)[0.12] | 0.65 | 1 | 0.45 | 1 | |
| rs2048493 | 165,826,514 | 0.47 | 0.35(0.31)[0.38] | 1 | 1 | 0.83 | 1 | |
| rs2668207 | 165,775,936 | 0.73 | 0.4(0.43)[0.38] | 0.44 | 1 | 0.51 | 1 | |
| rs28933389 | 165,830,222 | ND | 0(0)[0] | ND | 1 | ND | 1 | |
| rs28933390 | 165,829,781 | ND | 0(0)[0] | ND | 1 | ND | 1 | |
| rs4263329 | 165,821,822 | 1 | 0.12(0.10)[0.14] | 0.71 | 1 | 0.72 | 1 | |
| rs4680662 | 165,798,762 | 1 | 0.27(0.29)[0.26] | 0.68 | 1 | 1 | 1 | |
| rs829508 | 165,784,936 | 1 | 0.27(0.29)[0.26] | 0.68 | 1 | 1 | 1 | |
| rs8024987 | 32,044,027 | 1 | 0.25(0.24)[0.26] | 1 | 1 | 1 | 1 | |
| rs6494223 | 32,104,256 | 1 | 0.45(0.54)[0.36] | 0.65 | 1 | 0.23 | 1 | |
| rs3087454 | 32,028,764 | 0.47 | 0.37(0.40)[0.33] | 1 | 1 | 0.70 | 1 | |
| rs1355920 | 32,065,525 | 1 | 0.11(0.07)[0.14] | 0.43 | 1 | 0.45 | 1 | |
Notes
Nucleotide position is based on chromosome 3 and 15, NCBI Genome Reference Consortium Human Build 38.
Minor allele frequency: Combined (Case) (Control).
SNPs with the strongest observed association.
Abbreviations: BCHE, Butyrylcholinesterase; CHRNA7, Cholinergic Receptor Nicotinic Alpha-7 subunit; FDR, false discovery rate; MAF, minor allele frequency; NCBI, National Center for Biotechnology Information; ND, no data for p-values because of allele distribution; SNP, single-nucleotide polymorphism.