Literature DB >> 30346462

Effects of lipid composition on membrane permeation.

Michail Palaiokostas1, Wei Ding, Ganesh Shahane, Mario Orsi.   

Abstract

Passive permeation through lipid membranes is an essential process in biology. In vivo membranes typically consist of mixtures of lamellar and nonlamellar lipids. Lamellar lipids are characterized by their tendency to form lamellar sheet-like structures, which are predominant in nature. Nonlamellar lipids, when isolated, instead form more geometrically complex nonlamellar phases. While mixed lamellar/nonlamellar lipid membranes tend to adopt the ubiquitous lamellar bilayer structure, the presence of nonlamellar lipids is known to have profound effects on key membrane properties, such as internal distributions of stress and elastic properties, which in turn may alter related biological processes. This work focuses on one such process, i.e., permeation, by utilising atomistic molecular dynamics simulations in order to obtain transfer free energy profiles, diffusion profiles and permeation coefficients for a series of thirteen small molecules and drugs. Each permeant is tested on two bilayer membranes of different lipid composition, i.e., purely lamellar and mixed lamellar/nonlamellar. Our results indicate that the presence of nonlamellar lipids reduces permeation for smaller molecules (molecular weight < 100) but facilitates it for the largest ones (molecular weight > 100). This work represents an advancement towards the development of more realistic in silico permeability assays, which may have a substantial future impact in the area of rational drug design.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 30346462     DOI: 10.1039/c8sm01262h

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  7 in total

Review 1.  Molecular Dynamics Simulations of Membrane Permeability.

Authors:  Richard M Venable; Andreas Krämer; Richard W Pastor
Journal:  Chem Rev       Date:  2019-02-12       Impact factor: 60.622

2.  PerMM: A Web Tool and Database for Analysis of Passive Membrane Permeability and Translocation Pathways of Bioactive Molecules.

Authors:  Andrei L Lomize; Jacob M Hage; Kevin Schnitzer; Konstantin Golobokov; Mitchell B LaFaive; Alexander C Forsyth; Irina D Pogozheva
Journal:  J Chem Inf Model       Date:  2019-07-01       Impact factor: 4.956

3.  Physics-Based Method for Modeling Passive Membrane Permeability and Translocation Pathways of Bioactive Molecules.

Authors:  Andrei L Lomize; Irina D Pogozheva
Journal:  J Chem Inf Model       Date:  2019-07-01       Impact factor: 4.956

4.  Effects of lipid composition on membrane distribution and permeability of natural quinones.

Authors:  Murilo Hoias Teixeira; Guilherme Menegon Arantes
Journal:  RSC Adv       Date:  2019-05-29       Impact factor: 4.036

5.  Interaction of Antimicrobial Lipopeptides with Bacterial Lipid Bilayers.

Authors:  Ganesh Shahane; Wei Ding; Michail Palaiokostas; Helena S Azevedo; Mario Orsi
Journal:  J Membr Biol       Date:  2019-05-16       Impact factor: 1.843

6.  Molecular dynamics simulations and experimental studies reveal differential permeability of withaferin-A and withanone across the model cell membrane.

Authors:  Renu Wadhwa; Neetu Singh Yadav; Shashank P Katiyar; Tomoko Yaguchi; Chohee Lee; Hyomin Ahn; Chae-Ok Yun; Sunil C Kaul; Durai Sundar
Journal:  Sci Rep       Date:  2021-01-27       Impact factor: 4.379

7.  Enhanced water permeability across a physiological droplet interface bilayer doped with fullerenes.

Authors:  Jean-Baptiste Fleury
Journal:  RSC Adv       Date:  2020-05-22       Impact factor: 4.036

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.