Literature DB >> 30346277

Joint Classification and Prediction CNN Framework for Automatic Sleep Stage Classification.

Huy Phan, Fernando Andreotti, Navin Cooray, Oliver Y Chen, Maarten De Vos.   

Abstract

Correctly identifying sleep stages is important in diagnosing and treating sleep disorders. This paper proposes a joint classification-and-prediction framework based on convolutional neural networks (CNNs) for automatic sleep staging, and, subsequently, introduces a simple yet efficient CNN architecture to power the framework. Given a single input epoch, the novel framework jointly determines its label (classification) and its neighboring epochs' labels (prediction) in the contextual output. While the proposed framework is orthogonal to the widely adopted classification schemes, which take one or multiple epochs as contextual inputs and produce a single classification decision on the target epoch, we demonstrate its advantages in several ways. First, it leverages the dependency among consecutive sleep epochs while surpassing the problems experienced with the common classification schemes. Second, even with a single model, the framework has the capacity to produce multiple decisions, which are essential in obtaining a good performance as in ensemble-of-models methods, with very little induced computational overhead. Probabilistic aggregation techniques are then proposed to leverage the availability of multiple decisions. To illustrate the efficacy of the proposed framework, we conducted experiments on two public datasets: Sleep-EDF Expanded (Sleep-EDF), which consists of 20 subjects, and Montreal Archive of Sleep Studies (MASS) dataset, which consists of 200 subjects. The proposed framework yields an overall classification accuracy of 82.3% and 83.6%, respectively. We also show that the proposed framework not only is superior to the baselines based on the common classification schemes but also outperforms existing deep-learning approaches. To our knowledge, this is the first work going beyond the standard single-output classification to consider multitask neural networks for automatic sleep staging. This framework provides avenues for further studies of different neural-network architectures for automatic sleep staging.

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Year:  2018        PMID: 30346277      PMCID: PMC6487915          DOI: 10.1109/TBME.2018.2872652

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  35 in total

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2.  An open-source toolbox for standardized use of PhysioNet Sleep EDF Expanded Database.

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4.  Learning machines and sleeping brains: Automatic sleep stage classification using decision-tree multi-class support vector machines.

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Journal:  J Neurosci Methods       Date:  2015-01-25       Impact factor: 2.390

5.  A two-step automatic sleep stage classification method with dubious range detection.

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Journal:  Comput Biol Med       Date:  2015-01-29       Impact factor: 4.589

6.  Multichannel Sleep Stage Classification and Transfer Learning using Convolutional Neural Networks.

Authors:  Fernando Andreotti; Huy Phan; Navin Cooray; Christine Lo; Michele T M Hu; Maarten De Vos
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

7.  DeepSleepNet: A Model for Automatic Sleep Stage Scoring Based on Raw Single-Channel EEG.

Authors:  Akara Supratak; Hao Dong; Chao Wu; Yike Guo
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2017-06-28       Impact factor: 3.802

8.  Cardiorespiratory-based sleep staging in subjects with obstructive sleep apnea.

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Journal:  IEEE Trans Biomed Eng       Date:  2006-03       Impact factor: 4.538

9.  The American Academy of Sleep Medicine Inter-scorer Reliability program: respiratory events.

Authors:  Richard S Rosenberg; Steven Van Hout
Journal:  J Clin Sleep Med       Date:  2014-04-15       Impact factor: 4.062

10.  Automatic Sleep Stage Scoring Using Time-Frequency Analysis and Stacked Sparse Autoencoders.

Authors:  Orestis Tsinalis; Paul M Matthews; Yike Guo
Journal:  Ann Biomed Eng       Date:  2015-10-13       Impact factor: 3.934

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  18 in total

1.  SeqSleepNet: End-to-End Hierarchical Recurrent Neural Network for Sequence-to-Sequence Automatic Sleep Staging.

Authors:  Huy Phan; Fernando Andreotti; Navin Cooray; Oliver Y Chen; Maarten De Vos
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2019-01-31       Impact factor: 3.802

2.  An Attention-Guided Spatiotemporal Graph Convolutional Network for Sleep Stage Classification.

Authors:  Menglei Li; Hongbo Chen; Zixue Cheng
Journal:  Life (Basel)       Date:  2022-04-21

3.  Multi-scale ResNet and BiGRU automatic sleep staging based on attention mechanism.

Authors:  Changyuan Liu; Yunfu Yin; Yuhan Sun; Okan K Ersoy
Journal:  PLoS One       Date:  2022-06-16       Impact factor: 3.752

4.  Optimized splitting of mixed-species RNA sequencing data.

Authors:  Xuan Song; Hai Yun Gao; Karl Herrup; Ronald P Hart
Journal:  J Bioinform Comput Biol       Date:  2022-01-06       Impact factor: 1.204

5.  A deep learning algorithm based on 1D CNN-LSTM for automatic sleep staging.

Authors:  Dechun Zhao; Renpin Jiang; Mingyang Feng; Jiaxin Yang; Yi Wang; Xiaorong Hou; Xing Wang
Journal:  Technol Health Care       Date:  2022       Impact factor: 1.205

6.  CAttSleepNet: Automatic End-to-End Sleep Staging Using Attention-Based Deep Neural Networks on Single-Channel EEG.

Authors:  Tingting Li; Bofeng Zhang; Hehe Lv; Shengxiang Hu; Zhikang Xu; Yierxiati Tuergong
Journal:  Int J Environ Res Public Health       Date:  2022-04-25       Impact factor: 3.390

7.  Machine-learning-derived sleep-wake staging from around-the-ear electroencephalogram outperforms manual scoring and actigraphy.

Authors:  Kaare B Mikkelsen; James K Ebajemito; Maria A Bonmati-Carrion; Nayantara Santhi; Victoria L Revell; Giuseppe Atzori; Ciro Della Monica; Stefan Debener; Derk-Jan Dijk; Annette Sterr; Maarten de Vos
Journal:  J Sleep Res       Date:  2018-11-13       Impact factor: 3.981

8.  Automatic analysis of single-channel sleep EEG in a large spectrum of sleep disorders.

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Journal:  J Clin Sleep Med       Date:  2021-03-01       Impact factor: 4.062

9.  A Systematic Review of Closed-Loop Feedback Techniques in Sleep Studies-Related Issues and Future Directions.

Authors:  Jinyoung Choi; Moonyoung Kwon; Sung Chan Jun
Journal:  Sensors (Basel)       Date:  2020-05-13       Impact factor: 3.576

10.  Automatic Human Sleep Stage Scoring Using Deep Neural Networks.

Authors:  Alexander Malafeev; Dmitry Laptev; Stefan Bauer; Ximena Omlin; Aleksandra Wierzbicka; Adam Wichniak; Wojciech Jernajczyk; Robert Riener; Joachim Buhmann; Peter Achermann
Journal:  Front Neurosci       Date:  2018-11-06       Impact factor: 4.677

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