Literature DB >> 30344891

FUNCTIONAL CONNECTIVITY ANALYSIS FOR THALASSEMIA DISEASE BASED ON A GRAPHICAL LASSO MODEL.

Julie Coloigner1, Ronald Phlypo2, Adam Bush3, Natasha Lepore1, John Wood3.   

Abstract

Thalassemia is a congenital disorder of hemoglobin synthesis which can lead to thromboembolic events and stroke in the brain. In this work we propose to use a functional connectivity model to discriminate between control and diseased subjects. Our connectivity measure is based on functional magnetic resonance imaging, and hence common variations of the blood oxygenation level in spatially distant areas. Analyzing this connectivity could highlight abnormal neuronal activation and provide us with a descriptor (bio-marker) of the disease. To estimate the connectivity, we propose a robust learning scheme based on the graphical lasso model, whose hyperparameter is validated within a cross-validation scheme. To analyze model fit, we transfer the mean connectivity from the control group to the thalassemic patient group. Our null hypothesis is that the model learned on control subjects is perfectly adequate (in the maximum likelihood sense) to describe the patients. The results of the permutation test suggest that the some patients with thalassemia do not have the same connectivity structure as the control.

Entities:  

Keywords:  Connectivity; Graph theory; Graphical Lasso method; Resting state; Thalassemia disease; fMRI

Year:  2016        PMID: 30344891      PMCID: PMC6192020          DOI: 10.1109/ISBI.2016.7493504

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  12 in total

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2.  A component based noise correction method (CompCor) for BOLD and perfusion based fMRI.

Authors:  Yashar Behzadi; Khaled Restom; Joy Liau; Thomas T Liu
Journal:  Neuroimage       Date:  2007-05-03       Impact factor: 6.556

3.  Sparse inverse covariance estimation with the graphical lasso.

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Journal:  Biostatistics       Date:  2007-12-12       Impact factor: 5.899

4.  Multi-subject dictionary learning to segment an atlas of brain spontaneous activity.

Authors:  Gael Varoquaux; Alexandre Gramfort; Fabian Pedregosa; Vincent Michel; Bertrand Thirion
Journal:  Inf Process Med Imaging       Date:  2011

5.  Deriving a multi-subject functional-connectivity atlas to inform connectome estimation.

Authors:  Ronald Phlypo; Bertrand Thirion; Gaël Varoquaux
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

6.  A novel sparse group Gaussian graphical model for functional connectivity estimation.

Authors:  Bernard Ng; Gaël Varoquaux; Jean Baptiste Poline; Bertrand Thirion
Journal:  Inf Process Med Imaging       Date:  2013

7.  Functional connectivity: the principal-component analysis of large (PET) data sets.

Authors:  K J Friston; C D Frith; P F Liddle; R S Frackowiak
Journal:  J Cereb Blood Flow Metab       Date:  1993-01       Impact factor: 6.200

8.  Brain magnetic resonance angiography in splenectomized adults with β-thalassemia intermedia.

Authors:  Khaled M Musallam; Ahmad Beydoun; Roula Hourani; Wassim Nasreddine; Roy Raad; Suzanne Koussa; Ali T Taher
Journal:  Eur J Haematol       Date:  2011-12       Impact factor: 2.997

9.  Asymptomatic brain magnetic resonance imaging abnormalities in splenectomized adults with thalassemia intermedia.

Authors:  A T Taher; K M Musallam; W Nasreddine; R Hourani; A Inati; A Beydoun
Journal:  J Thromb Haemost       Date:  2009-10-11       Impact factor: 5.824

Review 10.  Cerebral infarction in β-thalassemia intermedia: breaking the silence.

Authors:  Khaled M Musallam; Ali T Taher; Mehran Karimi; Eliezer A Rachmilewitz
Journal:  Thromb Res       Date:  2012-08-03       Impact factor: 3.944

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  3 in total

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2.  Graph Lasso-Based Test for Evaluating Functional Brain Connectivity in Sickle Cell Disease.

Authors:  Julie Coloigner; Ronald Phlypo; Thomas D Coates; Natasha Lepore; John C Wood
Journal:  Brain Connect       Date:  2017-09

3.  Bootstrapping promotes the RSFC-behavior associations: An application of individual cognitive traits prediction.

Authors:  Lijiang Wei; Bin Jing; Haiyun Li
Journal:  Hum Brain Mapp       Date:  2020-03-16       Impact factor: 5.038

  3 in total

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