Literature DB >> 30339358

DNA Templated Metal Nanoclusters: From Emergent Properties to Unique Applications.

Yuxiang Chen1, M Lisa Phipps1, James H Werner1, Saumen Chakraborty2, Jennifer S Martinez3.   

Abstract

Metal nanoclusters containing a few to several hundred atoms with sizes ranging from sub-nanometer to ∼2 nm occupy an intermediate size regime that bridges larger plasmonic nanoparticles and smaller metal complexes. With strong quantum confinement, metal nanoclusters exhibit molecule-like properties. This Account focuses on noble metal nanoclusters that are synthesized within a single stranded DNA template. Compared to other ligand protected metal nanoclusters, DNA-templated metal nanoclusters manifest intriguing physical and chemical properties that are heavily influenced by the design of DNA templates. For example, DNA-templated silver nanoclusters can show bright fluorescence, tunable emission colors, and enhanced stability by tuning the sequence of the encapsulating DNA template. DNA-templated gold nanoclusters can also serve as excellent cocatalysts, which are integratable with other biocatalysts such as enzymes. In this Account, DNA-templated silver and gold nanoclusters are selected as paradigm systems to showcase their emergent properties and unique applications. We first discuss the DNA-templated silver nanoclusters with a focus on the creation of a complementary palette of emission colors, which has potential applications for multiplex assays. The importance of the DNA template toward enhanced stability of silver nanoclusters is also demonstrated. We then introduce a special class of activable fluorescence probes that are based on the fluorescence turn-on phenomena of DNA-templated silver nanoclusters, which are named nanocluster beacons (NCBs). NCBs have distinct advantages over molecular beacons for nucleic acid detection, and their emission mechanisms are also discussed in detail. We then discuss a universal method of creating novel DNA-silver nanocluster aptamers for protein detection with high specificity. The remainder of the Account is devoted to the DNA-templated gold nanoclusters. We demonstrate that DNA-gold nanoclusters can serve as enhancers for enzymatic reduction of oxygen, which is one of the most important reactions in biofuel cells. Although DNA-templated metal nanoclusters are still in their infancy, we anticipate they will emerge as a new type of functional nanomaterial with wide applications in biology and energy science. Future research will focus on the synthesis of size selected DNA-metal nanoclusters with atomic monodispersity, structural determination of different sized DNA-metal nanoclusters, and establishment of structure-property correlations. Some long-standing mysteries, such as the origin of fluorescence and mechanism for emission color tunability, constitute the central questions regarding the photophysical properties of DNA-metal nanoclusters. On the application side, more studies are required to understand the interaction between nanocluster and biological systems. In the foreseeable future, one can expect that new biosensors, catalysts, and functional devices will be invented based on the intriguing properties of well-designed DNA-metal nanoclusters and their composites. Overall, DNA-metal nanoclusters can add additional spotlights into the highly vibrant field of ligand protected, quantum sized metal nanoclusters.

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Year:  2018        PMID: 30339358     DOI: 10.1021/acs.accounts.8b00366

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  17 in total

1.  DNA-templated copper nanoclusters as a fluorescent probe for fluoride by using aluminum ions as a bridge.

Authors:  Jiawei Pang; Yuexiang Lu; Xinyu Gao; Liuying He; Jingwei Sun; Fengyi Yang; Zixuan Hao; Yueying Liu
Journal:  Mikrochim Acta       Date:  2019-05-18       Impact factor: 5.833

Review 2.  Recent progress in copper nanocluster-based fluorescent probing: a review.

Authors:  Taiping Qing; Kaiwu Zhang; Zhihe Qing; Xuan Wang; Caicheng Long; Peng Zhang; Haizhi Hu; Bo Feng
Journal:  Mikrochim Acta       Date:  2019-09-05       Impact factor: 5.833

3.  Fluorescent silver nanoclusters as antibody label in a competitive immunoassay for the complement factor H.

Authors:  Eva Valencia; María Cruz-Alonso; Lydia Álvarez; Héctor González-Iglesias; Beatriz Fernández; Rosario Pereiro
Journal:  Mikrochim Acta       Date:  2019-06-11       Impact factor: 5.833

4.  Fluorometric determination of microRNA by using target-triggered cascade signal amplification and DNA-templated silver nanoclusters.

Authors:  Hao Wu; Hongyong Wang; Yaling Liu; Jun Wu; Pei Zou
Journal:  Mikrochim Acta       Date:  2019-09-05       Impact factor: 5.833

5.  Fluorometric determination of microRNA using arched probe-mediated isothermal exponential amplification combined with DNA-templated silver nanoclusters.

Authors:  Hao Wu; Jun Wu; Yaling Liu; Hongyong Wang; Pei Zou
Journal:  Mikrochim Acta       Date:  2019-10-25       Impact factor: 5.833

6.  Detection of Pyrophosphate and Alkaline Phosphatase Activity Based on PolyT Single Stranded DNA - Copper Nanoclusters.

Authors:  Liu Yao; Xin Li; Hong Li; Zhibin Liao; Chuchu Xie; Ge Ning; Yaohui Wu; Yonghong Wang
Journal:  J Fluoresc       Date:  2022-07-01       Impact factor: 2.525

Review 7.  Protein Assembly by Design.

Authors:  Jie Zhu; Nicole Avakyan; Albert Kakkis; Alexander M Hoffnagle; Kenneth Han; Yiying Li; Zhiyin Zhang; Tae Su Choi; Youjeong Na; Chung-Jui Yu; F Akif Tezcan
Journal:  Chem Rev       Date:  2021-08-18       Impact factor: 72.087

8.  Target-induced in-situ formation of fluorescent DNA-templated copper nanoparticles by a catalytic hairpin assembly: application to the determination of DNA and thrombin.

Authors:  Tai Ye; Yan Peng; Min Yuan; Hui Cao; Jingsong Yu; Yan Li; Fei Xu
Journal:  Mikrochim Acta       Date:  2019-11-11       Impact factor: 5.833

9.  Large-scale investigation of the effects of nucleobase sequence on fluorescence excitation and Stokes shifts of DNA-stabilized silver clusters.

Authors:  Stacy M Copp; Anna Gonzàlez-Rosell
Journal:  Nanoscale       Date:  2021-03-04       Impact factor: 7.790

10.  Inhibition of DNA replication initiation by silver nanoclusters.

Authors:  Yu Tao; Tomas Aparicio; Mingqiang Li; Kam W Leong; Shan Zha; Jean Gautier
Journal:  Nucleic Acids Res       Date:  2021-05-21       Impact factor: 16.971

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