Literature DB >> 30338145

Visible-light optical coherence tomography oximetry based on circumpapillary scan and graph-search segmentation.

Brian T Soetikno1,2,3, Lisa Beckmann1, Xian Zhang1, Amani A Fawzi2, Hao F Zhang1,2.   

Abstract

Visible-light optical coherence tomography (vis-OCT) enables retinal oximetry by measuring the oxygen saturation of hemoglobin (sO2) from within individual retinal blood vessels. The sO2 calculation requires reliable estimation of the true spectrum of backscattered light from the posterior vessel wall. Unfortunately, subject motion and image noise make averaging from multiple A-lines at the same depth position challenging, and lead to inaccurate sO2 estimation. In this study, we developed an algorithm to reliably extract the backscattered light's spectrum. We used circumpapillary scanning to sample the vessels repeatedly at the same location. A combination of cross-correlation and graph-search based segmentation extracted the posterior wall locations. Using measurements from 100 B-scans as a gold standard, we demonstrated that our method achieved highly accurate measures of sO2 with minimal bias. In addition, we also investigated how the number of repeated measurements affects the accuracy of sO2 measurement. Our method sets the stage for large-scale studies of retinal oxygenation in animals and humans.

Entities:  

Keywords:  (170.2655) Functional monitoring and imaging; (170.4470) Ophthalmology; (170.4500) Optical coherence tomography

Year:  2018        PMID: 30338145      PMCID: PMC6191632          DOI: 10.1364/BOE.9.003640

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  31 in total

1.  Optimal surface segmentation in volumetric images--a graph-theoretic approach.

Authors:  Kang Li; Xiaodong Wu; Danny Z Chen; Milan Sonka
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

2.  Efficient subpixel image registration algorithms.

Authors:  Manuel Guizar-Sicairos; Samuel T Thurman; James R Fienup
Journal:  Opt Lett       Date:  2008-01-15       Impact factor: 3.776

3.  Retinal oximetry in humans using visible-light optical coherence tomography [Invited].

Authors:  Siyu Chen; Xiao Shu; Peter L Nesper; Wenzhong Liu; Amani A Fawzi; Hao F Zhang
Journal:  Biomed Opt Express       Date:  2017-02-07       Impact factor: 3.732

Review 4.  Retinal oxygen: fundamental and clinical aspects.

Authors:  Norbert D Wangsa-Wirawan; Robert A Linsenmeier
Journal:  Arch Ophthalmol       Date:  2003-04

5.  Measuring oxygen saturation in retinal and choroidal circulations in rats using visible light optical coherence tomography angiography.

Authors:  Siyu Chen; Ji Yi; Hao F Zhang
Journal:  Biomed Opt Express       Date:  2015-07-10       Impact factor: 3.732

6.  Retinal blood flow measurement by circumpapillary Fourier domain Doppler optical coherence tomography.

Authors:  Yimin Wang; Bradley A Bower; Joseph A Izatt; Ou Tan; David Huang
Journal:  J Biomed Opt       Date:  2008 Nov-Dec       Impact factor: 3.170

7.  Cerebral metabolic rate of oxygen (CMRO2) assessed by combined Doppler and spectroscopic OCT.

Authors:  Shau Poh Chong; Conrad W Merkle; Conor Leahy; Vivek J Srinivasan
Journal:  Biomed Opt Express       Date:  2015-09-11       Impact factor: 3.732

8.  Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation.

Authors:  Stephanie J Chiu; Xiao T Li; Peter Nicholas; Cynthia A Toth; Joseph A Izatt; Sina Farsiu
Journal:  Opt Express       Date:  2010-08-30       Impact factor: 3.894

9.  Inner retinal oxygen metabolism in the 50/10 oxygen-induced retinopathy model.

Authors:  Brian T Soetikno; Ji Yi; Ronil Shah; Wenzhong Liu; Patryk Purta; Hao F Zhang; Amani A Fawzi
Journal:  Sci Rep       Date:  2015-11-18       Impact factor: 4.379

10.  Long-Term Protection of Retinal Ganglion Cells and Visual Function by Brain-Derived Neurotrophic Factor in Mice With Ocular Hypertension.

Authors:  Liang Feng; Hui Chen; Ji Yi; John B Troy; Hao F Zhang; Xiaorong Liu
Journal:  Invest Ophthalmol Vis Sci       Date:  2016-07-01       Impact factor: 4.799

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  9 in total

1.  Longitudinal deep-brain imaging in mouse using visible-light optical coherence tomography through chronic microprism cranial window.

Authors:  Lisa Beckmann; Xian Zhang; Neil A Nadkarni; Zhen Cai; Ayush Batra; David P Sullivan; William A Muller; Cheng Sun; Roman Kuranov; Hao F Zhang
Journal:  Biomed Opt Express       Date:  2019-09-18       Impact factor: 3.732

2.  Retinal capillary oximetry with visible light optical coherence tomography.

Authors:  Shaohua Pi; Tristan T Hormel; Xiang Wei; William Cepurna; Bingjie Wang; John C Morrison; Yali Jia
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-12       Impact factor: 11.205

3.  Monitoring retinal responses to acute intraocular pressure elevation in rats with visible light optical coherence tomography.

Authors:  Shaohua Pi; Tristan T Hormel; Xiang Wei; William Cepurna; Acner Camino; Yukun Guo; David Huang; John Morrison; Yali Jia
Journal:  Neurophotonics       Date:  2019-07-12       Impact factor: 3.593

4.  Computational refocusing of Jones matrix polarization-sensitive optical coherence tomography and investigation of defocus-induced polarization artifacts.

Authors:  Lida Zhu; Shuichi Makita; Daisuke Oida; Arata Miyazawa; Kensuke Oikawa; Pradipta Mukherjee; Antonia Lichtenegger; Martin Distel; Yoshiaki Yasuno
Journal:  Biomed Opt Express       Date:  2022-04-22       Impact factor: 3.562

5.  Global and Regional Damages in Retinal Ganglion Cell Axon Bundles Monitored Non-Invasively by Visible-Light Optical Coherence Tomography Fibergraphy.

Authors:  Marta Grannonico; David A Miller; Mingna Liu; Pedro Norat; Christopher D Deppmann; Peter A Netland; Hao F Zhang; Xiaorong Liu
Journal:  J Neurosci       Date:  2021-10-26       Impact factor: 6.709

6.  Degeneration of Melanin-Containing Structures Observed Longitudinally in the Eyes of SOD1-/- Mice Using Intensity, Polarization, and Spectroscopic OCT.

Authors:  Conrad W Merkle; Marco Augustin; Danielle J Harper; Martin Glösmann; Bernhard Baumann
Journal:  Transl Vis Sci Technol       Date:  2022-10-03       Impact factor: 3.048

7.  Speckle reduction in visible-light optical coherence tomography using scan modulation.

Authors:  Ian Rubinoff; Lisa Beckmann; Yuanbo Wang; Amani A Fawzi; Xiaorong Liu; Jenna Tauber; Katie Jones; Hiroshi Ishikawa; Joel S Schuman; Roman Kuranov; Hao F Zhang
Journal:  Neurophotonics       Date:  2019-09-03       Impact factor: 3.593

8.  Deep spectral learning for label-free optical imaging oximetry with uncertainty quantification.

Authors:  Rongrong Liu; Shiyi Cheng; Lei Tian; Ji Yi
Journal:  Light Sci Appl       Date:  2019-11-20       Impact factor: 17.782

9.  Visible-Light Optical Coherence Tomography Fibergraphy for Quantitative Imaging of Retinal Ganglion Cell Axon Bundles.

Authors:  David A Miller; Marta Grannonico; Mingna Liu; Roman V Kuranov; Peter A Netland; Xiaorong Liu; Hao F Zhang
Journal:  Transl Vis Sci Technol       Date:  2020-10-09       Impact factor: 3.283

  9 in total

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