Literature DB >> 30334362

Single Molecule DNA Resensing Using a Two-Pore Device.

Yuning Zhang1, Xu Liu2, Yanan Zhao2, Jen-Kan Yu2, Walter Reisner1, William B Dunbar2.   

Abstract

A nanofluidic device is presented that, enables independent sensing and resensing of a single DNA molecule translocating through two nanopores with sub-micrometer spacing. The device concept is based upon integrating a thin nitride membrane with microchannels etched in borosilicate glass. Pores, coupled to each microchannel, are connected via a fluid-filled half-space on the device backside, enabling translocation of molecules across each pore in sequence. Critically, this approach allows for independent application of control voltage and measurement of trans-pore ionic current at each of the two pores, leading to 1) controlled assessment of molecular time of flight, 2) voltage-tuned selective molecule recapture, and 3) ability to acquire two correlated translocation signatures for each molecule analyzed. Finally, the rare cocapture of a single chain threading simultaneously through each of the two pores is reported.
© 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA; nanopore; solid state nanopore; two-pore

Mesh:

Substances:

Year:  2018        PMID: 30334362     DOI: 10.1002/smll.201801890

Source DB:  PubMed          Journal:  Small        ISSN: 1613-6810            Impact factor:   13.281


  8 in total

1.  Electronic Mapping of a Bacterial Genome with Dual Solid-State Nanopores and Active Single-Molecule Control.

Authors:  Arthur Rand; Philip Zimny; Roland Nagel; Chaitra Telang; Justin Mollison; Aaron Bruns; Emily Leff; Walter W Reisner; William B Dunbar
Journal:  ACS Nano       Date:  2022-03-18       Impact factor: 18.027

2.  Discriminating protein tags on a dsDNA construct using a Dual Nanopore Device.

Authors:  Swarnadeep Seth; Arthur Rand; Walter Reisner; William B Dunbar; Robert Sladek; Aniket Bhattacharya
Journal:  Sci Rep       Date:  2022-07-04       Impact factor: 4.996

3.  DNA barcodes using a double nanopore system.

Authors:  Swarnadeep Seth; Aniket Bhattacharya
Journal:  Sci Rep       Date:  2021-05-07       Impact factor: 4.379

Review 4.  Multi-resolution simulation of DNA transport through large synthetic nanostructures.

Authors:  Adnan Choudhary; Christopher Maffeo; Aleksei Aksimentiev
Journal:  Phys Chem Chem Phys       Date:  2022-02-02       Impact factor: 3.676

5.  High-Fidelity Capture, Threading, and Infinite-Depth Sequencing of Single DNA Molecules with a Double-Nanopore System.

Authors:  Adnan Choudhary; Himanshu Joshi; Han-Yi Chou; Kumar Sarthak; James Wilson; Christopher Maffeo; Aleksei Aksimentiev
Journal:  ACS Nano       Date:  2020-11-11       Impact factor: 15.881

6.  Engineering adjustable two-pore devices for parallel ion transport and DNA translocations.

Authors:  Yung-Chien Chou; Joshua Chen; Chih-Yuan Lin; Marija Drndić
Journal:  J Chem Phys       Date:  2021-03-14       Impact factor: 3.488

7.  On-Chip Stretching, Sorting, and Electro-Optical Nanopore Sensing of Ultralong Human Genomic DNA.

Authors:  Adam Zrehen; Diana Huttner; Amit Meller
Journal:  ACS Nano       Date:  2019-11-26       Impact factor: 15.881

8.  DNA barcode by flossing through a cylindrical nanopore.

Authors:  Swarnadeep Seth; Aniket Bhattacharya
Journal:  RSC Adv       Date:  2021-06-10       Impact factor: 4.036

  8 in total

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