Literature DB >> 30333299

Gut microbiota-derived D-serine protects against acute kidney injury.

Yusuke Nakade1, Yasunori Iwata2,3, Kengo Furuichi3,4, Masashi Mita5, Kenji Hamase6, Ryuichi Konno7, Taito Miyake3, Norihiko Sakai3, Shinji Kitajima3, Tadashi Toyama3, Yasuyuki Shinozaki3, Akihiro Sagara3, Taro Miyagawa3, Akinori Hara3, Miho Shimizu3, Yasutaka Kamikawa3, Kouichi Sato3, Megumi Oshima3, Shiori Yoneda-Nakagawa3, Yuta Yamamura3, Shuichi Kaneko8, Tetsuya Miyamoto9, Masumi Katane9, Hiroshi Homma9, Hidetoshi Morita10, Wataru Suda11,12, Masahira Hattori12,13, Takashi Wada1,3.   

Abstract

Gut microbiota-derived metabolites play important roles in health and disease. D-amino acids and their L-forms are metabolites of gut microbiota with distinct functions. In this study, we show the pathophysiologic role of D-amino acids in association with gut microbiota in humans and mice with acute kidney injury (AKI). In a mouse kidney ischemia/reperfusion model, the gut microbiota protected against tubular injury. AKI-induced gut dysbiosis contributed to the altered metabolism of D-amino acids. Among the D-amino acids, only D-serine was detectable in the kidney. In injured kidneys, the activity of D-amino acid oxidase was decreased. Conversely, the activity of serine racemase was increased. The oral administration of D-serine mitigated the kidney injury in B6 mice and D-serine-depleted mice. D-serine suppressed hypoxia-induced tubular damage and promoted posthypoxic tubular cell proliferation. Finally, the D-serine levels in circulation were significantly correlated with the decrease in kidney function in AKI patients. These results demonstrate the renoprotective effects of gut-derived D-serine in AKI, shed light on the interactions between the gut microbiota and the kidney in both health and AKI, and highlight D-serine as a potential new therapeutic target and biomarker for AKI.

Entities:  

Keywords:  Amino acid metabolism; Microbiology; Nephrology

Mesh:

Substances:

Year:  2018        PMID: 30333299      PMCID: PMC6237464          DOI: 10.1172/jci.insight.97957

Source DB:  PubMed          Journal:  JCI Insight        ISSN: 2379-3708


  40 in total

1.  Transfer of intestinal microbiota from lean donors increases insulin sensitivity in individuals with metabolic syndrome.

Authors:  Anne Vrieze; Els Van Nood; Frits Holleman; Jarkko Salojärvi; Ruud S Kootte; Joep F W M Bartelsman; Geesje M Dallinga-Thie; Mariette T Ackermans; Mireille J Serlie; Raish Oozeer; Muriel Derrien; Anne Druesne; Johan E T Van Hylckama Vlieg; Vincent W Bloks; Albert K Groen; Hans G H J Heilig; Erwin G Zoetendal; Erik S Stroes; Willem M de Vos; Joost B L Hoekstra; Max Nieuwdorp
Journal:  Gastroenterology       Date:  2012-06-20       Impact factor: 22.682

2.  Dual substrate and reaction specificity in mouse serine racemase: identification of high-affinity dicarboxylate substrate and inhibitors and analysis of the beta-eliminase activity.

Authors:  Kvido Strísovský; Jana Jirásková; Adriana Mikulová; Lubomír Rulísek; Jan Konvalinka
Journal:  Biochemistry       Date:  2005-10-04       Impact factor: 3.162

Review 3.  The role of the gastrointestinal tract and microbiota on uremic toxins and chronic kidney disease development.

Authors:  David Briskey; Patrick Tucker; David W Johnson; Jeff S Coombes
Journal:  Clin Exp Nephrol       Date:  2016-03-10       Impact factor: 2.801

4.  Caenorhabditis elegans has two genes encoding functional d-aspartate oxidases.

Authors:  Masumi Katane; Yousuke Seida; Masae Sekine; Takemitsu Furuchi; Hiroshi Homma
Journal:  FEBS J       Date:  2006-11-28       Impact factor: 5.542

Review 5.  The role of the intestinal microbiota in type 1 diabetes mellitus.

Authors:  Mikael Knip; Heli Siljander
Journal:  Nat Rev Endocrinol       Date:  2016-01-04       Impact factor: 43.330

6.  Levels of D-serine in the brain and peripheral organs of serine racemase (Srr) knock-out mice.

Authors:  Mao Horio; Mami Kohno; Yuko Fujita; Tamaki Ishima; Ran Inoue; Hisashi Mori; Kenji Hashimoto
Journal:  Neurochem Int       Date:  2011-08-28       Impact factor: 3.921

Review 7.  The role of D-serine in peripheral tissues.

Authors:  Camila Montesinos Guevara; Ali R Mani
Journal:  Eur J Pharmacol       Date:  2016-03-31       Impact factor: 4.432

8.  Localization of serine racemase and its role in the skin.

Authors:  Ran Inoue; Yoko Yoshihisa; Yosuke Tojo; Chieko Okamura; Yuzo Yoshida; Jiro Kishimoto; Xinghua Luan; Masahiko Watanabe; Mineyuki Mizuguchi; Yuko Nabeshima; Kenji Hamase; Kenji Matsunaga; Tadamichi Shimizu; Hisashi Mori
Journal:  J Invest Dermatol       Date:  2014-01-17       Impact factor: 8.551

9.  Chiral amino acid metabolomics for novel biomarker screening in the prognosis of chronic kidney disease.

Authors:  Tomonori Kimura; Kenji Hamase; Yurika Miyoshi; Ryohei Yamamoto; Keiko Yasuda; Masashi Mita; Hiromi Rakugi; Terumasa Hayashi; Yoshitaka Isaka
Journal:  Sci Rep       Date:  2016-05-18       Impact factor: 4.379

10.  Interplay between microbial d-amino acids and host d-amino acid oxidase modifies murine mucosal defence and gut microbiota.

Authors:  Jumpei Sasabe; Yurika Miyoshi; Seth Rakoff-Nahoum; Ting Zhang; Masashi Mita; Brigid M Davis; Kenji Hamase; Matthew K Waldor
Journal:  Nat Microbiol       Date:  2016-07-25       Impact factor: 17.745

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  27 in total

1.  Long-term outcomes in mouse models of ischemia-reperfusion-induced acute kidney injury.

Authors:  Lauren Scarfe; Anna Menshikh; Emily Newton; Yuantee Zhu; Rachel Delgado; Charlene Finney; Mark P de Caestecker
Journal:  Am J Physiol Renal Physiol       Date:  2019-08-14

2.  Gut Microbiota-Immune System Interactions during Acute Kidney Injury.

Authors:  Sanjeev Noel; Fuad Mohammad; James White; Kyungho Lee; Sepideh Gharaie; Hamid Rabb
Journal:  Kidney360       Date:  2021-01-14

3.  d-Serine Mediates Cellular Proliferation for Kidney Remodeling.

Authors:  Atsushi Hesaka; Yusuke Tsukamoto; Shigeyuki Nada; Masataka Kawamura; Naotsugu Ichimaru; Shinsuke Sakai; Maiko Nakane; Masashi Mita; Daisuke Okuzaki; Masato Okada; Yoshitaka Isaka; Tomonori Kimura
Journal:  Kidney360       Date:  2021-08-16

4.  Kidney-Gut Crosstalk in AKI.

Authors:  Sang Kyung Jo
Journal:  Kidney360       Date:  2021-02-22

5.  Intestinal Bacterial Translocation Contributes to Diabetic Kidney Disease.

Authors:  Hoang Thuy Linh; Yasunori Iwata; Yasuko Senda; Yukiko Sakai-Takemori; Yusuke Nakade; Megumi Oshima; Shiori Nakagawa-Yoneda; Hisayuki Ogura; Koichi Sato; Taichiro Minami; Shinji Kitajima; Tadashi Toyama; Yuta Yamamura; Taro Miyagawa; Akinori Hara; Miho Shimizu; Kengo Furuichi; Norihiko Sakai; Hiroyuki Yamada; Katsuhiko Asanuma; Kouji Matsushima; Takashi Wada
Journal:  J Am Soc Nephrol       Date:  2022-03-09       Impact factor: 14.978

Review 6.  Significance of the Gut Microbiota in Acute Kidney Injury.

Authors:  Taku Kobayashi; Yasunori Iwata; Yusuke Nakade; Takashi Wada
Journal:  Toxins (Basel)       Date:  2021-05-22       Impact factor: 4.546

7.  NMDA Receptor Hypofunction in the Aging-Associated Malfunction of Peripheral Tissue.

Authors:  Angélica Rivera-Villaseñor; Frida Higinio-Rodríguez; Laura Nava-Gómez; Bárbara Vázquez-Prieto; Isnarhazni Calero-Vargas; Rafael Olivares-Moreno; Mónica López-Hidalgo
Journal:  Front Physiol       Date:  2021-06-24       Impact factor: 4.566

8.  Intra-body dynamics of D-serine reflects the origin of kidney diseases.

Authors:  Hiroki Okushima; Yukimasa Iwata; Atsushi Hesaka; Eri Sugimori; Tatsuhiko Ikeda; Maiko Nakane; Masashi Mita; Terumasa Hayashi; Yoshitaka Isaka; Tomonori Kimura
Journal:  Clin Exp Nephrol       Date:  2021-03-25       Impact factor: 2.801

Review 9.  D-Amino acids and kidney diseases.

Authors:  Tomonori Kimura; Atsushi Hesaka; Yoshitaka Isaka
Journal:  Clin Exp Nephrol       Date:  2020-02-29       Impact factor: 2.801

10.  Development of a cognitive function marker based on D-amino acid proportions using new chiral tandem LC-MS/MS systems.

Authors:  Ren Kimura; Hisashi Tsujimura; Masaru Tsuchiya; Satoko Soga; Noriyasu Ota; Atsushi Tanaka; Hunkyung Kim
Journal:  Sci Rep       Date:  2020-01-21       Impact factor: 4.379

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