| Literature DB >> 30325964 |
Johanna Fall1, Lorenzo Ciannelli2, Georg Skaret1, Edda Johannesen1.
Abstract
The trophic link between cod (Gadus sp.) and capelin (Mallotus sp.) is important in many panarctic ecosystems. Since the early 2000s, the Northeast Arctic cod stock (G. morhua) in the Barents Sea has increased greatly, and the sea has been exceptionally warm. Such changes have potentially large effects on species distributions and overlap, which in turn could affect the strength of species interactions. Due to its high latitude location, the Barents Sea has strong seasonal variation in physical conditions and interactions. To study drivers of variation in cod-capelin overlap, we use data from two annual surveys run in winter and in autumn of 2004-2015. We first model winter and autumn spatial distributions of mature and immature cod and capelin. We then calculate overlap from model predictions on a grid with similar spatial resolution as the survey data. Our approach allowed us to interpret changes in overlap as species-specific effects of stock size and temperature, while accounting for sampling variation due to sampling time and depth. We found that during winter both species expanded their distribution in response to increased stock sizes, but how strongly and where the expansion occurred varied. The effect of temperature on distributions varied in space, and differed for cod and capelin and for different components of the two species. The results for autumn were clearer and more consistent. Both species expanded their distribution areas as their stock sizes increased. A positive effect of temperature was found in the north-eastern Barents Sea, where temperatures were lowest at the start of the study. Overlap increased and shifted north-eastwards during the study period and remained high despite a decline in the capelin stock. The increased overlap during autumn could mainly be attributed to the shift in cod distribution with increased cod stock biomass.Entities:
Mesh:
Year: 2018 PMID: 30325964 PMCID: PMC6191152 DOI: 10.1371/journal.pone.0205921
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Cod and capelin stock biomass.
Biomass of cod (age 3+, estimated in winter) and capelin (age 1+, estimated in autumn) in the study years 2004–2015. The capelin biomass is from the assessment based on the acoustic estimate from the ecosystem survey, and the cod biomass is the most recent published stock assessment (cod 3+, capelin 1+, Tables 3.18 and 9.4 in [27]).
Fig 2Study area and sampling stations.
Demersal trawl stations used in the present study from A) the winter survey and B) the ecosystem survey in 2004–2015. The shade of the points indicates if the station was sampled early (dark) or late (light) in the study period. The background highlights the main bathymetric features of the Barents Sea. The winter survey runs in January—March each year with the purpose of obtaining abundance indices for stock assessment of cod and haddock (Melanogrammus aeglefinus). The winter survey has a stratified regular design with higher station density in strata with historically higher abundance of cod to minimize the overall sampling variance in the cod estimates. The ecosystem survey covers most of the Barents Sea shelf in August to early October. The aim of the survey is firstly to provide an acoustic estimate of the capelin stock for assessment and quota advice, and secondly to assess the ecosystem state by monitoring the most important ecosystem components. The ecosystem survey has a regular sampling grid, but higher station density around Svalbard due to strong depth gradients in this area, in the Hopen trench (2004–2007) due to higher densities of Pandalus borealis, and east of Svalbard due to higher density of capelin. In 2014, unusual ice conditions restricted the coverage of the northern Barents Sea in the ecosystem survey.
GAM statistics for all models by season and component (immature cod, mature cod, acoustic capelin, trawl capelin).
| Season | Species | Component | Model type | Model terms | Tw-p | ΔAIC | Dev % |
|---|---|---|---|---|---|---|---|
| Capelin | Habitat | 1.452 | 62.6 | ||||
| Candidate | 1.434 | -443.2 | 69.0 | ||||
| Candidate | 1.45 | -206.5 | 65.3 | ||||
| Candidate | 1.432 | -470.4 | 68.8 | ||||
| Candidate | 1.43 | -459.4 | 69.7 | ||||
| Candidate | 1.41 | -723.5 | 72.9 | ||||
| Candidate | 1.411 | -633.5 | 71.1 | ||||
| Cod | Habitat | 1.62 | 51.3 | ||||
| Extended habitat | 1.616 | -150.8 | 52.7 | ||||
| Candidate | 1.605 | -837.9 | 59.5 | ||||
| Candidate | 1.616 | -81.5 | 52.7 | ||||
| Candidate | 1.612 | -278.3 | 54.8 | ||||
| Candidate | 1.603 | -890.5 | 60.3 | ||||
| Candidate | 1.597 | -969.3 | 61.4 | ||||
| Candidate | 1.607 | -410.6 | 56.6 | ||||
| Habitat | 1.418 | 47.1 | |||||
| Extended habitat | 1.424 | -64.2 | 48.1 | ||||
| Candidate | 1.389 | -615.9 | 55.7 | ||||
| Candidate | 1.406 | -151.8 | 50.2 | ||||
| Candidate | 1.407 | -160.1 | 50.2 | ||||
| Candidate | 1.379 | -694.4 | 57.3 | ||||
| Candidate | 1.381 | -684.6 | 57.4 | ||||
| Candidate | 1.379 | -694.4 | 57.3 | ||||
| Capelin | Habitat | 1.58 | 58.9 | ||||
| Candidate | 1.576 | -79.7 | 61.6 | ||||
| Candidate | 1.555 | -212.0 | 64.3 | ||||
| Candidate | 1.571 | -76.8 | 61.2 | ||||
| Candidate | 1.557 | -249.5 | 65.6 | ||||
| Candidate | 1.576 | -101.1 | 62.5 | ||||
| Candidate | 1.559 | -172.8 | 64.3 | ||||
| Habitat | 1.793 | 31.0 | |||||
| Candidate | 1.786 | -205.0 | 35.4 | ||||
| Candidate | 1.79 | -78.6 | 33.0 | ||||
| Candidate | 1.786 | -236.4 | 35.7 | ||||
| Candidate | 1.784 | -250.7 | 36.5 | ||||
| Candidate | 1.782 | -311.2 | 37.5 | ||||
| Candidate | 1.784 | -248.8 | 36.3 | ||||
| Cod | Habitat | 1.658 | 50.4 | ||||
| Extended habitat | 1.657 | +10.0 | 50.6 | ||||
| Extended habitat | 1.655 | -48.7 | 51.2 | ||||
| Candidate | 1.661 | -204.1 | 53.5 | ||||
| Candidate | 1.65 | -165.6 | 53.0 | ||||
| Candidate | 1.654 | -54.6 | 51.9 | ||||
| Candidate | 1.661 | -201.1 | 54.0 | ||||
| Candidate | 1.664 | -81.6 | 52.8 | ||||
| Candidate | 1.657 | -26.1 | 52.1 | ||||
| Habitat | 1.533 | 54.2 | |||||
| Extended habitat | 1.537 | +99.3 | 53.1 | ||||
| Extended habitat | 1.537 | +102.8 | 53.0 | ||||
| Candidate | 1.541 | -114.0 | 55.3 | ||||
| Candidate | 1.535 | +46.2 | 54.0 | ||||
| Candidate | 1.534 | +50.7 | 54.1 | ||||
| Candidate | 1.539 | -78.8 | 55.6 | ||||
| Candidate | 1.538 | -101.0 | 55.7 | ||||
| Candidate | 1.538 | +145.3 | 53.0 | ||||
The terms for spatial position, s1(x,y), sun height, s2(sun ), and depth, s3(depth), were included in all models and are denoted “Base” in the table. Tw-p is the estimated Tweedie power parameter. Deviance explained (Dev %) is presented for the final model after removal of non-significant (n.s., p > 0.05) terms, and ΔAIC is the change in AIC relative to the habitat model for each component. The extended habitat models included local capelin density as predictor; here capA represents capelin sampled with acoustics and capT represents capelin caught in the bottom trawl. The chosen candidate model for each component is indicated in bold font.
aSunheight n.s.
bSunheight and depth n.s.
cDepth n.s
dn.s. term
Fig 3Autumn GAM smooth functions from the habitat models.
Non-linear regression between local densities of A-B) capelin, C-D) immature cod, and F-G) mature cod and the density-independent covariates depth (m) and temperature (°C). The effect of local capelin density (log10[NASC+1]) from the extended habitat models on E) immature cod density and H) mature cod density is also shown. The plot shows the (centered) log local species density as a function of each covariate when accounting for the other covariate effects. The horizontal line at y = 0 represents a neutral contribution of the covariate to the response. The grey bands represent ± 2 standard errors around the smooth estimate.
Fig 4Predicted autumn distributions.
Autumn distributions of A-B) capelin, C-D) immature cod, and E-F) mature cod, as predicted from the best candidate model for each component (Table 1). The different columns show the partial effects of stock biomass when the other model predictors were set to their across-year mean values at each location; the left column shows species distributions at low stock biomass (capelin: 0.628, cod: 1.63 million tonnes, measured in 2004), and the right at high stock biomass (capelin: 3.96, cod: 4.38 million tonnes, measured in 2013). The contour lines indicate local species density on the log-link scale, and the colours range from blue at low density to yellow at high density.
Fig 5Spatially variant effect of temperature on local cod and capelin densities.
The contour lines show how the slope of the linear regression between local species density and mean pelagic temperature (capelin) or bottom temperature (cod) from the best candidate models vary in space for A) acoustically estimated capelin in autumn, B) immature cod in autumn, C) mature cod in autumn, D) acoustically estimated capelin in winter, E) trawl-caught capelin in winter, F) immature cod in winter, and G) mature cod in winter. Blue colours indicate negative slopes, and pink colours indicate positive slopes.
Fig 6Winter GAM smooth functions from the habitat models.
Non-linear regression between local densities of A-B) capelin sampled acoustically, C-D) capelin sampled with demersal trawl, F-G) immature cod, J-K) mature cod, and depth (m) and temperature (°C). The effect of local acoustic (log10[NASC+1]) and trawl capelin (log10[ind x nmi-2+1]) densities from the extended habitat models are shown for H-I) immature cod and L-M) mature cod. The plot shows the (centered) log local species density as a function of the covariate when accounting for the other covariate effects. The horizontal line at 0 corresponds to a neutral contribution of the covariate to the response. The grey bands illustrate ± 2 standard errors around the smooth estimate. Panel E) shows probability density distributions of capelin length in demersal trawl hauls south and north of 74°. The distributions were calculated from the catch numbers of capelin in each 1 cm-length group using R base function “density” with default settings. Capelin matures at approximately 14 cm [23].
Fig 7Predicted winter distributions.
Winter distributions of A-B) acoustically estimated capelin, C-D) trawl-caught capelin, E-F) immature cod, and G-H) mature cod from the best candidate model for each component (Table 1). The different columns show the partial effects of stock biomass when the other model predictors were set to their across-year mean values in each location; the left column shows species distributions at low stock biomass (capelin: 0.628, cod: 1.63 million tonnes, measured in 2004), and the right at high stock biomass (capelin: 3.96, cod: 4.38 million tonnes, measured in 2013). The contour lines indicate local species density on the log-link scale, and the colours range from blue at low density to yellow at high density.
Fig 8Cod-capelin overlap by season.
Overlap (O) by component at contrasting cod and capelin biomass for A) autumn and B) winter, calculated on model predictions from the best candidate models. ICAC = immature cod and acoustic capelin, ICTC = immature cod and trawl capelin, MCAC = mature cod and acoustic capelin, MCTC = mature cod and trawl capelin. Overlap values > 0.4 (n = 11) in autumn and > 0.1 (n = 20) in winter were set to black colour to enable good visualisation of the variation in the main overlap range. Note the different ranges of the colour scales in the two seasons. The values in the bottom left corners of each panel is the correlation coefficient (Kendall’s tau) between the predicted cod and capelin densities across the grid.
Fig 9Temporal trends in the overlap.
Mean overlap across the grid (magnitude, upper panels) and overlap extent (number of grid cells with overlap > 0.001 divided by the total number of grid cells, lower panels), by year, season, and component pair. ICAC = immature cod and acoustic capelin, ICTC = immature cod and trawl capelin, MCAC = mature cod and acoustic capelin, MCTC = mature cod and trawl capelin. The error bars show 95% confidence intervals of the mean. The sharp dip in the autumn ICAC overlap in 2014 is likely due to incomplete coverage of the immature cod component [27].
Fig 10Autumn temperatures.
Ecosystem survey measurements of A) mean pelagic temperature (50–200 m) in the entire study area, B) mean pelagic temperature in the north-eastern area (east of 40 E, north of 75 N), C) bottom temperature in the entire study area, D) bottom temperature in the north-eastern area, throughout the study period.