Literature DB >> 30324036

Optimize Transfer Learning for Lung Diseases in Bronchoscopy Using a New Concept: Sequential Fine-Tuning.

Tao Tan1,2, Zhang Li3, Haixia Liu4, Farhad G Zanjani5, Quchang Ouyang6, Yuling Tang7, Zheyu Hu6, Qiang Li8.   

Abstract

Bronchoscopy inspection, as a follow-up procedure next to the radiological imaging, plays a key role in the diagnosis and treatment design for lung disease patients. When performing bronchoscopy, doctors have to make a decision immediately whether to perform a biopsy. Because biopsies may cause uncontrollable and life-threatening bleeding of the lung tissue, thus doctors need to be selective with biopsies. In this paper, to help doctors to be more selective on biopsies and provide a second opinion on diagnosis, we propose a computer-aided diagnosis (CAD) system for lung diseases, including cancers and tuberculosis (TB). Based on transfer learning (TL), we propose a novel TL method on the top of DenseNet: sequential fine-tuning (SFT). Compared with traditional fine-tuning (FT) methods, our method achieves the best performance. In a data set of recruited 81 normal cases, 76 TB cases and 277 lung cancer cases, SFT provided an overall accuracy of 82% while other traditional TL methods achieved an accuracy from 70% to 74%. The detection accuracy of SFT for cancers, TB, and normal cases are 87%, 54%, and 91%, respectively. This indicates that the CAD system has the potential to improve lung disease diagnosis accuracy in bronchoscopy and it may be used to be more selective with biopsies.

Entities:  

Keywords:  Bronchoscopy; DenseNet; computer-aided diagnosis; deep learning; lung cancer; sequential fine-tuning; transfer learning; tuberculosis

Year:  2018        PMID: 30324036      PMCID: PMC6175035          DOI: 10.1109/JTEHM.2018.2865787

Source DB:  PubMed          Journal:  IEEE J Transl Eng Health Med        ISSN: 2168-2372            Impact factor:   3.316


  35 in total

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3.  Virtual bronchoscopy: segmentation method for real-time display.

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4.  Standard Plane Localization in Fetal Ultrasound via Domain Transferred Deep Neural Networks.

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5.  Multisource Transfer Learning With Convolutional Neural Networks for Lung Pattern Analysis.

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6.  The Global Burden of Cancer 2013.

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Review 7.  Lung cryobiopsies: a paradigm shift in diagnostic bronchoscopy?

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8.  Computerized detection of breast cancer on automated breast ultrasound imaging of women with dense breasts.

Authors:  Karen Drukker; Charlene A Sennett; Maryellen L Giger
Journal:  Med Phys       Date:  2014-01       Impact factor: 4.071

9.  An Assisted Diagnosis System for Detection of Early Pulmonary Nodule in Computed Tomography Images.

Authors:  Ji-Kui Liu; Hong-Yang Jiang; Meng-di Gao; Chen-Guang He; Yu Wang; Pu Wang; He Ma; Ye Li
Journal:  J Med Syst       Date:  2016-12-28       Impact factor: 4.460

10.  Low Prevalence of High-Grade Lesions Detected With Autofluorescence Bronchoscopy in the Setting of Lung Cancer Screening in the Pan-Canadian Lung Cancer Screening Study.

Authors:  Alain Tremblay; Niloofar Taghizadeh; Annette M McWilliams; Paul MacEachern; David R Stather; Kam Soghrati; Serge Puksa; John R Goffin; Kazuhiro Yasufuku; Kayvan Amjadi; Garth Nicholas; Simon Martel; Francis Laberge; Michael Johnston; Frances A Shepherd; Diana N Ionescu; Stefan Urbanski; David Hwang; Jean-Claude Cutz; Harmanjatinder S Sekhon; Christian Couture; Zhaolin Xu; Tom G Sutedja; Sukhinder Atkar-Khattra; Martin C Tammemagi; Ming-Sound Tsao; Stephen C Lam
Journal:  Chest       Date:  2016-04-30       Impact factor: 9.410

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5.  Shock due to an Obstructed Endotracheal Tube.

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6.  A Deep Learning Computer-Aided Diagnosis Approach for Breast Cancer.

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