Knockdown of RNF6 inhibits gastric cancer cell growth by suppressing STAT3 signaling.

BACKGROUND AND
OBJECTIVE: RNF6, an E3 ligase, has been reported to play an important role in the tumorigenesis in several tissues, but its role in gastric cancer is still unknown. In this study, we aimed to investigate the biological function and molecular mechanisms of RNF6 in gastric cancer.
MATERIALS AND METHODS: The expression levels of RNF6 were detected by quantitative real-time PCR (qRT-PCR) and immunoblotting in gastric cancer tissues and cell lines. Cell Counting Kit-8 assay was performed to evaluate cell proliferation. Cell apoptosis was analyzed by flow cytometer and immunoblotting. Luciferase assay, immunoblotting and qRT-PCR were performed to explore the activation of STAT3. Immunoprecipitation was performed to evaluate the ubiquitination of SHP-1.
RESULTS: In this study, RNF6 was found to be upregulated in both primary tissues and cell lines of gastric cancer. Knockdown or overexpression of RNF6 inhibited or promoted cell growth of gastric cancer cells. Knockdown of RNF6 also induced the cleavage of PARP and promoted cell apoptosis in gastric cancer cells. In addition, knockdown of RNF6 also increased the cytotoxicity of doxorubicin against gastric cancer. Moreover, knockdown of RNF6 inhibited STAT3-derived luciferase activity and downregulated the phosphorylation of STAT3, but upregulated the protein level of SHP-1. Knockdown of RNF6 downregulated the expression of MCL1 and XIAP, which are target genes of STAT3. Further studies showed that RNF6 regulated the stability of SHP-1 by inducing its polyubiquitination.
CONCLUSION: These results demonstrated that RNF6 was highly expressed in gastric cancer and regulated the growth of gastric cancer cells by affecting SHP-1/STAT3 signaling, which suggested that RNF6 could be a novel target for gastric cancer therapy.

Introduction

Gastric cancer is the most common gastrointestinal malignancy and a leading cause of cancer-related deaths worldwide.1 There are about 700,000 confirmed mortalities annually worldwide.2 Although therapy regimens for gastric cancer include surgery, radiation, chemotherapy or a combination, it is still difficult to treat gastric cancer in clinic where it is often found late.3 Therefore, there is an urgent demand to identify new targets and drugs to improve systemic therapy for gastric cancer patients.

RNF6 belongs to the largest E3 ligase family and plays an important role in the tumorigenesis in several tissues.4 At first, RNF6 was considered a tumor suppressor because of its mutations and its location on chromosome 13q12 in human esophageal squamous cell carcinoma.5 But recent studies have indicated that RNF6 is more likely an oncogene.

Recent studies showed that RNF6 was upregulated in colorectal cancer and promoted colorectal tumorigenesis by activating Wnt/β-catenin pathway or JAK/STAT3 pathway.6,7 In leukemia, RNF6, as a direct target of the transcription factor PBX1, was overexpressed and induced leukemia cell growth.8 RNF6 was also upregulated in breast cancer and predicted a poor prognosis of breast cancer patients.9 RNF6 promoted breast cancer cell growth by increasing the stability of estrogen receptor alpha (ERα), thus targeting the RNF6/ERα/Bcl-xL pathway may be a promising strategy for breast cancer treatment.9 RNF6 was also found highly expressed in prostate cancer and promoted the transcriptional activity of androgen receptor (AR) by mediating its atypical polyubiquitination at Lys-6 and Lys-27.10 However, the studies on RNF6 are very limited, and the biological function of RNF6 is still unknown in most tumors, including gastric cancer.

In this study, we evaluated the function of RNF6 in gastric cancer cells and found that RNF6 was upregulated in gastric cancer cells and contributed to gastric cancer cell growth. Moreover, knockdown of RNF6 suppressed the phosphorylation of STAT3 in gastric cancer cells, but upregulated the protein level of SHP-1, a negative regulator of STAT3. In addition, decreased RNF6 enhanced the cytotoxicity of doxorubicin (DOX) against gastric cancer cells.

Materials and methods

Cells, tissues and chemicals

Gastric cancer cell lines such as AGS, HGC-27, MGC80-3, NCI-N87 and SNU-1 and a human normal gastric mucosal cell line were purchased from Shanghai Cell Institute of Chinese Academy of Sciences (Shanghai, China). HEK293T cell line was purchased from American Type Culture Collection (ATCC, Manassas, VA, USA). All gastric cancer cell lines, human normal gastric mucosal cell line and HEK293T were maintained in DMEM with 10% FBS, 100 U/mL of streptomycin and 100 µg/mL of penicillin. Mycoplasma tests of the cell lines used in this study have been carried out before starting the experiments. DOX was purchased from Sigma-Aldrich Co. (St Louis, MO, USA).

Quantitative real-time PCR (qRT-PCR)

The qRT-PCR was performed as previously described.11 First, total RNA was extracted by Trizol reagent according to the manufacturer’s instructions (Takara Bio Group, Kusatsu, Japan). Then, cDNA was synthesized from equal quantities of total RNA by PrimeScript™ RT reagent Kit (Takara Bio Group). Subsequently, to determine the mRNA levels of RNF6, MCL1 and XIAP, qRT-PCR was performed by using SYBR Green qPCR Master Mix (Takara Bio Group) on a Roche LightCycler® 480II real-time PCR system (Hoffman-La Roche Ltd., Basel, Switzerland). The primers used were as follows: RNF6, forward 5′-AGAAGATGGCAGCAAGAGCG-3′ and reverse 5′-TCAAGTCAGGCTGAGATGCTAGT-3′; MCL1, forward 5′-GCGACGGCGTAACAAACT-3′ and reverse 5′-ATTCCTGATGCCACCTTCTAG-3′; XIAP, forward 5′-TGGCAGATTATGAAGCAC-3′ and reverse 5′-CTCCTCCACAGTGAAAGC-3′; SHP-1, forward 5′-GAA CGCTAAGACCTACATCG-3′ and reverse 5′-AGTATGG GACGCATTTGTT-3′; GAPDH, forward 5′-GCACCGTCA AGGCTGAGAAC-3′ and reverse 5′-TGGTGAAGACG CCAGTGGA-3′.

Immunoblotting

Immunoblotting analysis was performed as described previously.12–14 Whole cell lysates were lysed, and equal amounts of total proteins were subjected to SDS-PAGE separation, followed by immunoblotting with specific antibodies. The primary antibody against RNF6 was purchased from Thermo Fisher Scientific (Waltham, MA, USA; dilution: 1:1,000). Anti-PARP, cyclin D1, p-STAT3, STAT3, SHP-1, MCL1, Bcl-2 and GAPDH antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA; dilutions: 1:1,000). Anti-Ub antibody was purchased from Santa Cruz Biotechnology Inc. (Dallas, TX, USA; dilution: 1:500). Anti-mouse and anti-rabbit immunoglobulin G (IgG) horseradish peroxidase-conjugated antibodies were purchased from Beyotime Biotechnology, Inc. (Nantong, China; dilutions: 1:1,000).

Lentivirus construction and infection

The lentivirus-delivered shRNAs against RNF6 (shRNF6) were synthesized from Suzhou GenePharma Co., Ltd. (Suzhou, China). The target sequences of shRNF6#1 and shRNF6#2 were 5′-TCAGGCAATTACCTTGCAT-3′ and 5′-ATAACAGTTCCTCTTCGTA-3′. Indicative lentiviral particles were produced in HEK293T cells and infected with NCI-N87 and SNU-1 cells.

Plasmid construction and gene transfection

The human RNF6 gene was amplified by PCR and cloned into pcDNA3.1 vector with a Myc tag as previously described.8 The primers for RNF6 amplification were as follows: forward 5′-ATGAATCAGTCTAGATCGAGATCAG-3′; reverse 5′-TTACCCATTGTTTGCTATGTTAGACCC-3′. Empty vector or Myc-RNF6 plasmids were transiently transfected into NCI-N87 cells by Lipofectamine® 2000 (Thermo Fisher Scientific) according to the manufacturer’s instruction.

Cell growth and viability

Viable cells were analyzed by Cell Counting Kit-8 (CCK-8) assay according to the manufacturer’s instructions (Biotool, Houston, TX, USA) as described previously.11 NCI-N87 cells, infected with shRNF6#1, shRNF6#2 or shNC, were treated with 0.5 µM DOX or dimethyl sulfoxide (DMSO) for 24 hours, followed by CCK-8 assay.

Cell apoptosis analysis

NCI-N87 and SNU-1 cells were infected with indicated lentivirus for 3 days, and then cells were collected for staining with Annexin V–fluorescein isothiocyanate (FITC) and propidium iodide (PI) for 5 minutes in the dark. Then, stained cells were prepared for cell apoptosis analysis on a flow cytometer (FACSCalibur®; BD Biosciences, San Jose, CA, USA) as described previously.15

Luciferase assay

NCI-N87 and SNU-1 cells were transfected with STAT3-Luc by Lipofectamine 2000 for 24 hours, followed by infection with shRNF6#1, shRNF6#2 or shNC. Three days later, cells were lysed for luciferase assay by using Dual-Luciferase® Reporter Assay System according to the manufacturer’s instructions (Promega Corporation, Fitchburg, WI, USA) as described previously.16

Immunoprecipitation analysis

The whole cell lysates were prepared for immunoprecipitation as described previously.14 First, the whole cell lysates were incubated with normal IgG or SHP-1 antibody overnight at 4°C, followed by incubation with protein A/G Sepharose beads (Santa Cruz Biotechnology Inc.) for 4 hours. The co-precipitated proteins were identified by immunoblotting analysis against Ub and SHP-1.

Statistical analyses

Student’s t-test was used for significant analysis in the studies. All statistical tests were two sided, and statistical significance was defined as a P-value of <0.05.

Results

RNF6 is overexpressed in gastric cancer and regulates gastric cancer cell growth

To evaluate the expression level of RNF6 in gastric cancer, The Cancer Genome Atlas database was first used for analysis, and, as shown in Figure 1A, RNF6 was obviously upregulated in tumor tissues of gastric cancer. Then, to confirm this result, 20 pairs of adjacent normal tissues and tumor tissues from gastric cancer patients were collected, and the qRT-PCR showed that the mRNA level of RNF6 was significantly higher in tumor tissues than the adjacent normal tissues (Figure 1B). The protein level of RNF6 was also upregulated in representative tumor tissues (Figure 1C). Moreover, RNF6 was upregulated in gastric cancer cell lines compared with normal gastric mucosal cell line (Figure 1D and E).

Figure 1

RNF6 is overexpressed in gastric cancer.

Notes: (A) The expression level of RNF6 was evaluated using TCGA database. T, tumor tissue; N, normal tissue. (B) Twenty pairs of adjacent normal tissues and tumor tissues from gastric cancer patients were applied for qRT-PCR analysis to measure the mRNA level of RNF6. GAPDH was used as an internal control. (C) The protein levels of RNF6 were detected by immunoblotting using tissues from representative patients as listed in B. (D) GES-1, AGS, HGC-27, MGC80-3, NCI-N87 and SNU-1 cell lines were prepared for immunoblotting against RNF6. GAPDH was used as a loading control. (E) Statistical analysis of D. *P<0.05, **P<0.01.

Abbreviations: qRT-PCR, quantitative real-time PCR; TCGA, The Cancer Genome Atlas.

These results suggested that RNF6 was upregulated in both tumor tissues and gastric cancer cell lines; we then evaluated whether RNF6 regulated the cell growth of gastric cancer. As shown in Figure 2A and B, knockdown of RNF6 significantly inhibited the cell growth of both NCI-N87 and SNU-1 cells, along with cyclin D1 downregulation, which was involved in regulating cell cycle progression. In addition, the overexpression of RNF6 promoted the cell growth of both NCI-N87 and SNU-1 cells, along with cyclin D1 upregulation (Figure 2C and D). These results suggested that RNF6 was functional in gastric cancer and regulated the growth of gastric cancer cells.

Figure 2

RNF6 regulates gastric cancer cell growth.

Notes: (A, B) shRNF6#1-, shRNF6#2- or shNC-derived lentivirus was infected into NCI-N87 and SNU-1 cells, and cell viability was measured at the indicated times by CCK-8 staining. The expression levels of RNF6 and cyclin D1 were also detected by immunoblotting analysis. GAPDH was used as an internal control. (C, D) NCI-N87 and SNU-1 cells were infected with PLVX-NC- or PLVX-RNF6-derived lentivirus, and cell viability was measured at the indicated times by CCK-8 staining. The expression of RNF6 was also detected by immunoblotting analysis. *P<0.05, **P<0.01.

Abbreviation: CCK-8, Cell Counting Kit-8.

Knockdown of RNF6 induces cell apoptosis and increases the cytotoxicity of DOX in gastric cancer

To find out whether cell apoptosis was also triggered by silenced RNF6, flow cytometry was performed by using Annexin V and propidium iodide staining. As shown in Figure 3A, compared with cells infected with shNC-derived lentivirus, cells infected with shRNF6#1 or shRNF6#2 harbored a significant increase in Annexin V+ in both NCI-N87 and SNU-1 cells. Immunoblotting analysis also revealed that knockdown of RNF6 induced the cleavage of PARP and inhibited the expression levels of anti-apoptotic protein MCL1 in both NCI-N87 and SNU-1 cells (Figure 3B), which further suggested that knockdown of RNF6 induced cell apoptosis in gastric cancer cells.

Figure 3

Knockdown of RNF6 induces cell apoptosis and increases the cytotoxicity of DOX in gastric cancer.

Notes: (A) NCI-N87 and SNU-1 cells were infected with the indicated lentivirus for 3 days, and then cells were prepared for cell apoptosis analysis by Annexin V and PI staining on a flow cytometer. (B) The above mentioned cells were also prepared for immunoblotting against RNF6, cleaved PARP, Bcl-2 or MCL1. GAPDH was used as a loading control. (C) NCI-N87 cells were infected with shRNF6#1, shRNF6#2 or shNC for 48 hours, and then cells were treated with 0.5 µM DOX or DMSO for 24 hours, followed by immunoblotting against RNF6, p-STAT3 and STAT3. GAPDH was used as a loading control. (D) Cells shown in (C) were also prepared for CCK-8 assay.

Abbreviations: CCK-8, Cell Counting Kit-8; DMSO, dimethyl sulfoxide; DOX, doxorubicin; FITC, fluorescein isothiocyanate; PI, propidium iodide.

DOX is one of the most common chemotherapeutic drugs for many tumors, including gastric cancer, but frequent resistance was found in the process of tumor treatment in the clinic.17–19 A genetic approach was also used to explore the synergistic action of shRNF6 and DOX. Two shRNAs against RNF6 were used to knock down RNF6 in NCI-N87 cells (Figure 3C), and CCK-8 assay showed that the viability of NCI-N87 cells decreased only tô80% when treated with DOX alone, but viability went down markedly tô50% with synergistic action of shRNF6 and DOX (Figure 3D). Therefore, suppressing RNF6 enhanced the cytotoxic activity of DOX, and targeting RNF6 during DOX therapy had potential to improve outcomes.

Knockdown of RNF6 inhibits STAT3 signaling in gastric cancer

Recently, it was reported that RNF6 amplification activated STAT3 signaling in colorectal cancer,7 and we wanted to evaluate whether this occurred in gastric cancer. First, we collected four cell lines of gastric cancer, and we found that RNF6 and phospho-STAT3 were co-expressed, such that HGC-27 and MGC80-3 cells harbored lower levels of RNF6 and phospho-STAT3, but NCI-N87 and SNU-1 cells harbored higher levels (Figure 4A). Then, STAT3-derived luciferase assay was performed and results showed that knockdown of RNF6 suppressed the luciferase activity in both NCI-N87 and SNU-1 cells (Figure 4B). In addition, immunoblotting also revealed that knockdown of RNF6 downregulated the phosphorylation of STAT3 in both NCI-N87 and SNU-1 cells (Figure 4C). In addition, the downregulation of RNF6 by shRNA also downregulated the mRNA levels of STAT3 target genes MCL1 and XIAP (Figure 4D and E). These results suggested that RNF6 regulates STAT3 signaling in gastric cancer cells.

Figure 4

Knockdown of RNF6 inhibits STAT3 signaling in gastric cancer.

Notes: (A) HGC-27, MGC80-3, NCI-N87 and SNU-1 cells were prepared for immunoblotting against RNF6, p-STAT3 and STAT3. GAPDH was used as an internal control. (B) NCI-N87 and SNU-1 cells transfected with STAT3-Luc were infected with shRNF6#1, shRNF6#2 or shNC for 3 days, and then cells were lysed for luciferase assay. (C) NCI-N87 and SNU-1 cells were infected with shRNF6#1, shRNF6#2 or shNC for 3 days, followed by immunoblotting against RNF6, p-STAT3 and STAT3. GAPDH was used as an internal control. (D, E) shRNF6#1, shRNF6#2 or shNC were infected into NCI-N87 cells. Three days later, cells were prepared for qRT-PCR against MCL1 (D) and XIAP (E). *P<0.01, #P<0.01.

Abbreviation: qRT-PCR, quantitative real-time PCR.

RNF6 regulates the stability of SHP-1 by inducing its polyubiquitination

SHP-1 is a non-transmembrane protein tyrosine phosphatase, and it serves as an important negative regulator of the STAT3 signaling pathway.20 As shown in Figures 4C and 5A, knockdown of RNF6 inhibited the phosphorylation of STAT3, but upregulated the expression levels of SHP-1. In addition, the mRNA levels of SHP-1 were not affected by knockdown of RNF6 (Figure 5B). To further confirm this result, NCI-N87 cells were transfected with increased concentrations of Myc-RNF6 plasmids, and we found that the protein level of SHP-1 was significantly downregulated in a dose-dependent manner (Figure 5C), but the mRNA level was not affected (Figure 5D). Furthermore, RNF6, the E3 ligase, induced the polyubiquitination of SHP-1 protein (Figure 5E). These results suggested that RNF6 regulated the stability of SHP-1 protein by affecting its polyubiquitination in gastric cancer cells.

Figure 5

RNF6 regulates the stability of SHP-1 by inducing its polyubiquitination.

Notes: (A, B) NCI-N87 cells were infected with shNC, shRNF6#1 or shRNF6#2 for 3 days. Then, cells were prepared for immunoblotting and qRT-PCR as indicated. (C, D) NCI-N87 cells were transfected with increased concentrations of Myc-RNF6 plasmids. Three days later, cells were prepared for immunoblotting and qRT-PCR as indicated. (E) NCI-N87 cells were transfected with EV or Myc-RNF6 plasmids for 3 days, and then cells were prepared for immunoprecipitation with normal IgG or SHP-1 antibody, followed by immunoblotting analysis against Ub and SHP-1.

Abbreviations: EV, empty vector; n.s., nonsense; qRT-PCR, quantitative real-time PCR.

Discussion

As shown by the successful application of bortezomib in the treatment of hematological malignancies, the ubiquitin– proteasome system (UPS) has been a useful target for anti-tumor drug discovery.21–23 But many patients developed resistance to bortezomib, and one potential strategy to combat bortezomib resistance is to target upstream components of the UPS, such as E3 ligase.24,25 Therefore, investigating the function of E3 ligases in tumorigenesis is significant for tumor therapy in clinical practice.

Recently, the function of E3 ligase RNF6 in tumorigenesis and tumor development has generated much attention. However, the function of RNF6 in gastric cancer is still unknown. In this study, RNF6 was demonstrated to be an oncogene in gastric cancer. RNF6 was highly expressed in gastric cancer tissues and cell lines (Figure 1), and knockdown of RNF6 induced gastric cancer cell growth inhibition and apoptosis (Figures 2 and 3). Interestingly, a recent study reported that saponins, the amphipathic glycosides found in traditional Chinese medicines, displayed potent antileukemia activity by suppressing RNF6 expression along with inactivated AKT/mTOR signaling.26 In contrast, RNF6 was also believed to be a tumor suppressor in esophageal squamous cell carcinomas because of its chromosomal location and somatic mutations.5 Together with these reports, we believed that RNF6 was a double-faceted gene in different cell types and could be as a target for specific tumor therapy.

STAT3 is an oncogenic transcription factor, and constitutive STAT3 activation induces tumorigenesis and commonly suggests poor prognosis in many tumors, including gastric cancer.27,28 STAT3 has been considered as an ideal drug target for various cancer treatments.29,30 In this study, we identified that RNF6 regulated STAT3 activation by affecting the polyubiquitination of SHP-1, which was a negative regulator of STAT3 signaling, and RNF6-SHP-1-STAT3 pathway could be a promising target for gastric cancer treatment (Figures 4 and 5).

DOX is a common chemotherapeutic drug in the treatment of gastric cancer, but patients frequently develop resistance to it partly because of overactivated STAT3.31,32 As described earlier, RNF6 enhanced the activation of STAT3, therefore we wanted to assess whether suppressing RNF6 could enhance the efficacy of DOX in gastric cancer cells. As shown in Figure 3C and D, knockdown of RNF6 enhanced the cytotoxic activity of DOX against gastric cancer cells, which showed potential clinical relevance and was meaningful for drug resistance therapy. Therefore, targeting RNF6 could be an effective strategy for gastric cancer treatment in the future.

Conclusion

This study demonstrated that RNF6 triggered STAT3 signaling, thus promoting the growth of gastric cancer cells. This study suggests that targeting RNF6-SHP-1-STAT3 pathway can be a promising approach for gastric cancer therapy in the future.

Ethics approval and consent to participate

This study was approved by the review board and ethical committee of The Affiliated Huaian No 1 People’s Hospital of Nanjing Medical University, and each patient provided written informed consent to donate tissues for this study after clinical procedures.