Literature DB >> 30319908

Detection of exudates in fundus photographs with imbalanced learning using conditional generative adversarial network.

Rui Zheng1, Lei Liu2, Shulin Zhang1, Chun Zheng3, Filiz Bunyak4, Ronald Xu1, Bin Li2, Mingzhai Sun1.   

Abstract

Diabetic retinopathy (DR) is a leading cause of blindness worldwide. However, 90% of DR caused blindness can be prevented if diagnosed and intervened early. Retinal exudates can be observed at the early stage of DR and can be used as signs for early DR diagnosis. Deep convolutional neural networks (DCNNs) have been applied for exudate detection with promising results. However, there exist two main challenges when applying the DCNN based methods for exudate detection. One is the very limited number of labeled data available from medical experts, and another is the severely imbalanced distribution of data of different classes. First, there are many more images of normal eyes than those of eyes with exudates, particularly for screening datasets. Second, the number of normal pixels (non-exudates) is much greater than the number of abnormal pixels (exudates) in images containing exudates. To tackle the small sample set problem, an ensemble convolutional neural network (MU-net) based on a U-net structure is presented in this paper. To alleviate the imbalance data problem, the conditional generative adversarial network (cGAN) is adopted to generate label-preserving minority class data specifically to implement the data augmentation. The network was trained on one dataset (e_ophtha_EX) and tested on the other three public datasets (DiaReTDB1, HEI-MED and MESSIDOR). CGAN, as a data augmentation method, significantly improves network robustness and generalization properties, achieving F1-scores of 92.79%, 92.46%, 91.27%, and 94.34%, respectively, as measured at the lesion level. While without cGAN, the corresponding F1-scores were 92.66%, 91.41%, 90.72%, and 90.58%, respectively. When measured at the image level, with cGAN we achieved the accuracy of 95.45%, 92.13%, 88.76%, and 89.58%, compared with the values achieved without cGAN of 86.36%, 87.64%, 76.33%, and 86.42%, respectively.

Entities:  

Year:  2018        PMID: 30319908      PMCID: PMC6179403          DOI: 10.1364/BOE.9.004863

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  28 in total

1.  Automated localisation of the optic disc, fovea, and retinal blood vessels from digital colour fundus images.

Authors:  C Sinthanayothin; J F Boyce; H L Cook; T H Williamson
Journal:  Br J Ophthalmol       Date:  1999-08       Impact factor: 4.638

2.  Automated detection of diabetic retinopathy on digital fundus images.

Authors:  C Sinthanayothin; J F Boyce; T H Williamson; H L Cook; E Mensah; S Lal; D Usher
Journal:  Diabet Med       Date:  2002-02       Impact factor: 4.359

3.  A contribution of image processing to the diagnosis of diabetic retinopathy--detection of exudates in color fundus images of the human retina.

Authors:  Thomas Walter; Jean-Claude Klein; Pascale Massin; Ali Erginay
Journal:  IEEE Trans Med Imaging       Date:  2002-10       Impact factor: 10.048

4.  A coarse-to-fine strategy for automatically detecting exudates in color eye fundus images.

Authors:  Daniel Welfer; Jacob Scharcanski; Diane Ruschel Marinho
Journal:  Comput Med Imaging Graph       Date:  2009-12-01       Impact factor: 4.790

5.  A multiscale optimization approach to detect exudates in the macula.

Authors:  Carla Agurto; Victor Murray; Honggang Yu; Jeffrey Wigdahl; Marios Pattichis; Sheila Nemeth; E Simon Barriga; Peter Soliz
Journal:  IEEE J Biomed Health Inform       Date:  2014-07       Impact factor: 5.772

6.  Exudate detection in color retinal images for mass screening of diabetic retinopathy.

Authors:  Xiwei Zhang; Guillaume Thibault; Etienne Decencière; Beatriz Marcotegui; Bruno Laÿ; Ronan Danno; Guy Cazuguel; Gwénolé Quellec; Mathieu Lamard; Pascale Massin; Agnès Chabouis; Zeynep Victor; Ali Erginay
Journal:  Med Image Anal       Date:  2014-05-22       Impact factor: 8.545

7.  Exudate-based diabetic macular edema detection in fundus images using publicly available datasets.

Authors:  Luca Giancardo; Fabrice Meriaudeau; Thomas P Karnowski; Yaqin Li; Seema Garg; Kenneth W Tobin; Edward Chaum
Journal:  Med Image Anal       Date:  2011-07-23       Impact factor: 8.545

8.  Detection of exudates in fundus photographs using deep neural networks and anatomical landmark detection fusion.

Authors:  Pavle Prentašić; Sven Lončarić
Journal:  Comput Methods Programs Biomed       Date:  2016-10-06       Impact factor: 5.428

9.  Automated detection and differentiation of drusen, exudates, and cotton-wool spots in digital color fundus photographs for diabetic retinopathy diagnosis.

Authors:  Meindert Niemeijer; Bram van Ginneken; Stephen R Russell; Maria S A Suttorp-Schulten; Michael D Abràmoff
Journal:  Invest Ophthalmol Vis Sci       Date:  2007-05       Impact factor: 4.799

10.  Statistical atlas based exudate segmentation.

Authors:  Sharib Ali; Désiré Sidibé; Kedir M Adal; Luca Giancardo; Edward Chaum; Thomas P Karnowski; Fabrice Mériaudeau
Journal:  Comput Med Imaging Graph       Date:  2013-07-27       Impact factor: 4.790

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  4 in total

Review 1.  The use of deep learning technology for the detection of optic neuropathy.

Authors:  Mei Li; Chao Wan
Journal:  Quant Imaging Med Surg       Date:  2022-03

Review 2.  Application of machine learning in ophthalmic imaging modalities.

Authors:  Yan Tong; Wei Lu; Yue Yu; Yin Shen
Journal:  Eye Vis (Lond)       Date:  2020-04-16

3.  EAD-Net: A Novel Lesion Segmentation Method in Diabetic Retinopathy Using Neural Networks.

Authors:  Cheng Wan; Yingsi Chen; Han Li; Bo Zheng; Nan Chen; Weihua Yang; Chenghu Wang; Yan Li
Journal:  Dis Markers       Date:  2021-09-01       Impact factor: 3.434

4.  Automatic detection of non-perfusion areas in diabetic macular edema from fundus fluorescein angiography for decision making using deep learning.

Authors:  Kai Jin; Xiangji Pan; Kun You; Jian Wu; Zhifang Liu; Jing Cao; Lixia Lou; Yufeng Xu; Zhaoan Su; Ke Yao; Juan Ye
Journal:  Sci Rep       Date:  2020-09-15       Impact factor: 4.379

  4 in total

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