Literature DB >> 30318906

Dynamic Functional Magnetic Resonance Imaging Connectivity Tensor Decomposition: A New Approach to Analyze and Interpret Dynamic Brain Connectivity.

Fatemeh Mokhtari1,2, Paul J Laurienti1,3, W Jack Rejeski1,3,4, Grey Ballard5.   

Abstract

There is a growing interest in using so-called dynamic functional connectivity, as the conventional static brain connectivity models are being questioned. Brain network analyses yield complex network data that are difficult to analyze and interpret. To deal with the complex structures, decomposition/factorization techniques that simplify the data are often used. For dynamic network analyses, data simplification is of even greater importance, as dynamic connectivity analyses result in a time series of complex networks. A new challenge that must be faced when using these decomposition/factorization techniques is how to interpret the resulting connectivity patterns. Connectivity patterns resulting from decomposition analyses are often visualized as networks in brain space, in the same way that pairwise correlation networks are visualized. This elevates the risk of conflating connections between nodes that represent correlations between nodes' time series with connections between nodes that result from decomposition analyses. Moreover, dynamic connectivity data may be represented with three-dimensional or four-dimensional (4D) tensors and decomposition results require unique interpretations. Thus, the primary goal of this article is to (1) address the issues that must be considered when interpreting the connectivity patterns from decomposition techniques and (2) show how the data structure and decomposition method interact to affect this interpretation. The outcome of our analyses is summarized as follows. (1) The edge strength in decomposition connectivity patterns represents complex relationships not pairwise interactions between the nodes. (2) The structure of the data significantly alters the connectivity patterns, for example, 4D data result in connectivity patterns with higher regional connections. (3) Orthogonal decomposition methods outperform in feature reduction applications, whereas nonorthogonal decomposition methods are better for mechanistic interpretation.

Keywords:  dynamic brain connectivity; interpretation; tensor decomposition/factorization

Mesh:

Year:  2018        PMID: 30318906      PMCID: PMC6390668          DOI: 10.1089/brain.2018.0605

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  30 in total

1.  Principal components of functional connectivity: a new approach to study dynamic brain connectivity during rest.

Authors:  Nora Leonardi; Jonas Richiardi; Markus Gschwind; Samanta Simioni; Jean-Marie Annoni; Myriam Schluep; Patrik Vuilleumier; Dimitri Van De Ville
Journal:  Neuroimage       Date:  2013-07-18       Impact factor: 6.556

2.  Weight-conserving characterization of complex functional brain networks.

Authors:  Mikail Rubinov; Olaf Sporns
Journal:  Neuroimage       Date:  2011-04-01       Impact factor: 6.556

3.  A Tensor Decomposition-Based Approach for Detecting Dynamic Network States From EEG.

Authors:  Arash Golibagh Mahyari; David M Zoltowski; Edward M Bernat; Selin Aviyente
Journal:  IEEE Trans Biomed Eng       Date:  2016-04-13       Impact factor: 4.538

4.  Groupwise whole-brain parcellation from resting-state fMRI data for network node identification.

Authors:  X Shen; F Tokoglu; X Papademetris; R T Constable
Journal:  Neuroimage       Date:  2013-06-04       Impact factor: 6.556

Review 5.  The dynamic functional connectome: State-of-the-art and perspectives.

Authors:  Maria Giulia Preti; Thomas Aw Bolton; Dimitri Van De Ville
Journal:  Neuroimage       Date:  2016-12-26       Impact factor: 6.556

6.  Time-frequency dynamics of resting-state brain connectivity measured with fMRI.

Authors:  Catie Chang; Gary H Glover
Journal:  Neuroimage       Date:  2009-12-16       Impact factor: 6.556

Review 7.  Dynamic functional connectivity: promise, issues, and interpretations.

Authors:  R Matthew Hutchison; Thilo Womelsdorf; Elena A Allen; Peter A Bandettini; Vince D Calhoun; Maurizio Corbetta; Stefania Della Penna; Jeff H Duyn; Gary H Glover; Javier Gonzalez-Castillo; Daniel A Handwerker; Shella Keilholz; Vesa Kiviniemi; David A Leopold; Francesco de Pasquale; Olaf Sporns; Martin Walter; Catie Chang
Journal:  Neuroimage       Date:  2013-05-24       Impact factor: 6.556

8.  Periodic changes in fMRI connectivity.

Authors:  Daniel A Handwerker; Vinai Roopchansingh; Javier Gonzalez-Castillo; Peter A Bandettini
Journal:  Neuroimage       Date:  2012-07-14       Impact factor: 6.556

9.  The Cooperative Lifestyle Intervention Program-II (CLIP-II): design and methods.

Authors:  Anthony P Marsh; James A Janssen; Walter T Ambrosius; Jonathan H Burdette; Jill E Gaukstern; Ashley R Morgan; Beverly A Nesbit; J Brielle Paolini; Jessica L Sheedy; W Jack Rejeski
Journal:  Contemp Clin Trials       Date:  2013-08-23       Impact factor: 2.226

Review 10.  The chronnectome: time-varying connectivity networks as the next frontier in fMRI data discovery.

Authors:  Vince D Calhoun; Robyn Miller; Godfrey Pearlson; Tulay Adalı
Journal:  Neuron       Date:  2014-10-22       Impact factor: 17.173

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  1 in total

1.  A mixed-modeling framework for whole-brain dynamic network analysis.

Authors:  Mohsen Bahrami; Paul J Laurienti; Heather M Shappell; Dale Dagenbach; Sean L Simpson
Journal:  Netw Neurosci       Date:  2022-06-01
  1 in total

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